RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 PHLDB3Q6NSJ2 640 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BRSK2Q8IWQ3 736 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ACTRT1Q8TDG2 376 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RMDN3Q96TC7 470 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CBWD1Q9BRT8 395 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 KIFC3Q9BVG8 833 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PARVGQ9HBI0 331 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ANKRD63C9JTQ0 380 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PDGFRBP09619 1106 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CHN1P15882 459 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CREB1P16220 341 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 VPS41P49754 854 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DR1Q01658 176 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BYSLQ13895 437 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DAB2IPQ5VWQ8 1189 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MICALCLQ6ZW33 695 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ZNF720Q7Z2F6 126 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ARHGEF19Q8IW93 802 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RNF146Q9NTX7 359 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 USP20Q9Y2K6 914 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TNFAIP3P21580 790 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HDAC4P56524 1084 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MAPK7Q13164 816 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GRM1Q13255 1194 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BMT2Q1RMZ1 405 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ARHGEF16Q5VV41 709 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PPP4R4Q6NUP7 873 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CD302Q8IX05 232 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PLEKHO2Q8TD55 490 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PWWP2AQ96N64 755 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ELAC2Q9BQ52 826 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EIF4E1BA6NMX2 242 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TBKBP1A7MCY6 615 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 VIMP08670 466 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GCLMP48507 274 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CUL1Q13616 776 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LBRQ14739 615 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CACNA2D3Q8IZS8 1091 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SYCP3Q8IZU3 236 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GIMAP7Q8NHV1 300 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CLEC4DQ8WXI8 215 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SLC5A5Q92911 643 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 KCNH7Q9NS40 1196 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 NENFQ9UMX5 172 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DAAM1Q9Y4D1 1078 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EXOC3O60645 756 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FSBPO95073 299 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SLC4A1P02730 911 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PPP3CAQ08209 521 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 UGCGQ16739 394 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EPC2Q52LR7 807 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 INO80DQ53TQ3 878 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SEPT14Q6ZU15 432 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TNIP2Q8NFZ5 429 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RUBCNQ92622 972 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EHMT1Q9H9B1 1298 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 UBE2TQ9NPD8 197 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 STXBP5LQ9Y2K9 1186 aa12.31□□□□□ -0.44
CDK5RAP3-231ENST00000584063 K7ENM7 598 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 KATNA1O75449 491 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 C7P10643 843 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SOX5P35711 763 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PLA2G4FQ68DD2 849 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 C7orf57Q8NEG2 295 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SYTL5Q8TDW5 730 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 OLFML3Q9NRN5 406 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BAIAP2L1Q9UHR4 511 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CEP350Q5VT06 3117 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DDX3YO15523 660 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ACSL3O95573 720 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CDC25CP30307 473 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PRKCIP41743 596 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RAB27AP51159 221 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 NPEPPSP55786 919 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TMEM132BQ14DG7 1078 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms