RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 ZFP37Q9Y6Q3 630 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 WDR87Q6ZQQ6 2873 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 JAK2O60674 1132 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 KINO60870 393 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 XYLBO75191 536 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 ABL1P00519 1130 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 CD72P21854 359 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 OR1D2P34982 312 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 ELAVL2Q12926 359 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 PRPF4BQ13523 1007 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 SUZ12Q15022 739 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 ME3Q16798 604 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 RSPO2Q6UXX9 243 aaPredicted RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 DGLUCYQ7Z3D6 616 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 CATSPER3Q86XQ3 398 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 SUMF1Q8NBK3 374 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 NSUN7Q8NE18 718 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 MCPH1Q8NEM0 835 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 RUBCNQ92622 972 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 GTF3C6Q969F1 213 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 SHDQ96IW2 340 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 ADPGKQ9BRR6 497 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 DDX23Q9BUQ8 820 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 KIFC3Q9BVG8 833 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 BCO2Q9BYV7 579 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 CCDC113Q9H0I3 377 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 C2orf40Q9H1Z8 148 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 LTB4R2Q9NPC1 389 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 SPATA6Q9NWH7 488 aaPredicted RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 DNMT3BQ9UBC3 853 aaKnown RBP8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 MTRRQ9UBK8 725 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 DCTN4Q9UJW0 460 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 GDAQ9Y2T3 454 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 CDY1Q9Y6F8 540 aa8.58□□□□□ -1.04
SMCHD1-210ENST00000583800 FAM170BA6NMN3 283 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 I3L4J1 428 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 ACKR2O00590 384 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 LAMTOR5O43504 91 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 B3GAT3O94766 335 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 XRCC6P12956 609 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 FGFR3P22607 806 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 TKTP29401 623 aaKnown RBP8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 MCM7P33993 719 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 NAMPTP43490 491 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 BRCC3P46736 316 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 CLCNKBP51801 687 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 PRKCQQ04759 706 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 RAB33AQ14088 237 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 MAPK6Q16659 721 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 SLC5A9Q2M3M2 681 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 PABPC1LQ4VXU2 614 aaKnown RBP8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 SLC44A4Q53GD3 710 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 PDXDC1Q6P996 788 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 CD300LGQ6UXG3 332 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 TPRG1Q6ZUI0 275 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 C3orf58Q8NDZ4 430 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 DEPTORQ8TB45 409 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 MCRS1Q96EZ8 462 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 POLD4Q9HCU8 107 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 TUFT1Q9NNX1 390 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 RALGAPA1Q6GYQ0 2036 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 F5P12259 2224 aa8.57□□□□□ -1.04
SMCHD1-210ENST00000583800 NCOR2Q9Y618 2525 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 ANK1P16157 1881 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 FRYLO94915 3013 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 ARHGEF35A5YM69 484 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 TMEM189-UBE2V1I3L0A0 370 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 SIAH2O43255 324 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 PRMT3O60678 531 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 RHOP08100 348 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 POU2F2P09086 479 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 CEBPBP17676 345 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 CYP11B2P19099 503 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 TARSP26639 723 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 MAPK1P28482 360 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 PFKPQ01813 784 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 GUCY1B3Q02153 619 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 CSTF1Q05048 431 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 SOX4Q06945 474 aaPredicted RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 ST3GAL1Q11201 340 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF211Q13398 564 aaPredicted RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 TRIM29Q14134 588 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 PUM1Q14671 1186 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 ANKRD1Q15327 319 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 EML3Q32P44 896 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 DCAF4L1Q3SXM0 396 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 TSSK4Q6SA08 328 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 CEP120Q8N960 986 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms