RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 USP37Q86T82 979 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 CEP57Q86XR8 500 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 MRPL43Q8N983 215 aaKnown RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 BORCS6Q96GS4 357 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 FAM84AQ96KN4 292 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 MTMR12Q9C0I1 747 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 ZBP1Q9H171 429 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 CHST7Q9NS84 486 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 ANO10Q9NW15 660 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 ITGA11Q9UKX5 1188 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
SNRPD1-204ENST00000582475 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
SNRPD1-204ENST00000582475 CHD9Q3L8U1 2897 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 I3L4J1 428 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 IKBKBO14920 756 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 SLC16A3O15427 465 aaKnown RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 LILRB3O75022 631 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 ITGB3P05106 788 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 KRT19P08727 400 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 CA8P35219 290 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 LILRA4P59901 499 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 MCCD1P59942 119 aaPredicted RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 CLDN10P78369 228 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 DSG1Q02413 1049 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 BFSP1Q12934 665 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 SMC1AQ14683 1233 aaKnown RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 KIAA0319Q5VV43 1072 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 DSTYKQ6XUX3 929 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 AUTS2Q8WXX7 1259 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 MED15Q96RN5 788 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 TTPALQ9BTX7 342 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 NSUN3Q9H649 340 aaKnown RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 METTL14Q9HCE5 456 aaKnown RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 MRPL17Q9NRX2 175 aaKnown RBP12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 SIX4Q9UIU6 781 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 PCDHGC5Q9Y5F6 944 aa12.99□□□□□ -0.33
SNRPD1-204ENST00000582475 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 ANK1P16157 1881 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 C2orf71A6NGG8 1288 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 HIDE1A8MVS5 230 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 C2CD2LO14523 706 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 SPTLC1O15269 473 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 PHACTR2O75167 634 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 GNA14O95837 355 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 URODP06132 367 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 FGFR3P22607 806 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 PNPLA4P41247 253 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 GLUD2P49448 558 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 TAF6P49848 677 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 TRPC3Q13507 836 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 CCDC85BQ15834 202 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 STX1AQ16623 288 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 CCDC40Q4G0X9 1142 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 C1orf220Q5T0J3 134 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 GPR65Q8IYL9 337 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 CXorf38Q8TB03 319 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 PPP2R3CQ969Q6 453 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 RNF166Q96A37 237 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 SUSD3Q96L08 255 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 B3GALT6Q96L58 329 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 SENP8Q96LD8 212 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 TLE6Q9H808 572 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 ARMCX3Q9UH62 379 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 STXBP5LQ9Y2K9 1186 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 IRAK3Q9Y616 596 aa12.98□□□□□ -0.33
SNRPD1-204ENST00000582475 PDCD11Q14690 1871 aaKnown RBP12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 CDH23Q9H251 3354 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 M0QZQ0 153 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 SYN3O14994 580 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 PER2O15055 1255 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 TRIM49P0CI25 452 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 TRIM49CP0CI26 452 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 TKTP29401 623 aaKnown RBP12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 GTF2H1P32780 548 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 GCLMP48507 274 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 AARSP49588 968 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 TYRO3Q06418 890 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 BIRC3Q13489 604 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 PTPN14Q15678 1187 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 SV2CQ496J9 727 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 RTP2Q5QGT7 225 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 ADGRD2Q7Z7M1 963 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 RBM23Q86U06 439 aaKnown RBP12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 CREBRFQ8IUR6 639 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 APPL2Q8NEU8 664 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms