RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ANKRD36BP1Q96IX9 119 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 FNBP1Q96RU3 617 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 CDCA3Q99618 268 aaPredicted RBP17.71■□□□□ 0.43
RNF43-206ENST00000582293 TSG101Q99816 390 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 MKNK1Q9BUB5 465 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 CLEC1BQ9P126 229 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 FNIP2Q9P278 1114 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 SYN3O14994 580 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 CETN3O15182 167 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 VNN1O95497 513 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 TNNC2P02585 160 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 TRIM49P0CI25 452 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 TRIM49CP0CI26 452 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 CA8P35219 290 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 TAF6P49848 677 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 VAMP7P51809 220 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 PPP3CAQ08209 521 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 BFSP1Q12934 665 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 PSMD5Q16401 504 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 VARS2Q5ST30 1063 aaKnown RBP17.7■□□□□ 0.42
RNF43-206ENST00000582293 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 KIAA1841Q6NSI8 718 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 LRRC52Q8N7C0 313 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 FEZF2Q8TBJ5 459 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 SENP8Q96LD8 212 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 TIMM13Q9Y5L4 95 aaPredicted RBP17.7■□□□□ 0.42
RNF43-206ENST00000582293 HCFC2Q9Y5Z7 792 aa17.7■□□□□ 0.42
RNF43-206ENST00000582293 SLC16A3O15427 465 aaKnown RBP17.69■□□□□ 0.42
RNF43-206ENST00000582293 EPCAMP16422 314 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 CLCN4P51793 760 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 RBP5P82980 135 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 ENPEPQ07075 957 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 ZACNQ401N2 412 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 LILRA6Q6PI73 481 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 TMEM184AQ6ZMB5 413 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 INTS8Q75QN2 995 aaKnown RBP17.69■□□□□ 0.42
RNF43-206ENST00000582293 CEP63Q96MT8 703 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 XYLT2Q9H1B5 865 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 UBE2ZQ9H832 354 aaPredicted RBP17.69■□□□□ 0.42
RNF43-206ENST00000582293 CLDND1Q9NY35 253 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 RWDD2AQ9UIY3 292 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 BACE2Q9Y5Z0 518 aa17.69■□□□□ 0.42
RNF43-206ENST00000582293 KPNA7A9QM74 516 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 IKBKBO14920 756 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 CYP11A1P05108 521 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 KRT19P08727 400 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 TFF2Q03403 129 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 BMS1Q14692 1282 aaKnown RBP17.68■□□□□ 0.42
RNF43-206ENST00000582293 SKIV2LQ15477 1246 aaKnown RBP17.68■□□□□ 0.42
RNF43-206ENST00000582293 LLGL2Q6P1M3 1020 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 DSTYKQ6XUX3 929 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 SV2AQ7L0J3 742 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 LIMS2Q7Z4I7 341 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 GLYCTKQ8IVS8 523 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 PPP2R3CQ969Q6 453 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 ELMO3Q96BJ8 720 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 MSLNLQ96KJ4 702 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 ZNF560Q96MR9 790 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 RTP3Q9BQQ7 232 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 EMILIN2Q9BXX0 1053 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.68■□□□□ 0.42
RNF43-206ENST00000582293 GDAP2Q9NXN4 497 aa17.68■□□□□ 0.42
RNF43-206ENST00000582293 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
RNF43-206ENST00000582293 BICDL2A1A5D9 508 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 CYB561D2O14569 222 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 LRRN2O75325 713 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 OAZ2O95190 189 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 EPB41P11171 864 aaKnown RBP17.67■□□□□ 0.42
RNF43-206ENST00000582293 TYMPP19971 482 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 PAX3P23760 479 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 KLRC2P26717 231 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 PNPLA4P41247 253 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 NDUFV1P49821 464 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 MYL6P60660 151 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 SV2CQ496J9 727 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
RNF43-206ENST00000582293 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 FILIP1Q7Z7B0 1213 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 IRF2BP1Q8IU81 584 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 HLA-CQ95604 372 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 HPDLQ96IR7 371 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 FBXL5Q9UKA1 691 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 L1RE1Q9UN81 338 aa17.67■□□□□ 0.42
RNF43-206ENST00000582293 H3BQ06 376 aaPredicted RBP17.66■□□□□ 0.42
RNF43-206ENST00000582293 NCK2O43639 380 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 STAU1O95793 577 aaKnown RBP17.66■□□□□ 0.42
RNF43-206ENST00000582293 ADH1AP07327 375 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 OR1D2P34982 312 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 GCLMP48507 274 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 AP3M2P53677 418 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 WSCD1Q658N2 575 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 SLC8B1Q6J4K2 584 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 SYCE2Q6PIF2 218 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 PALB2Q86YC2 1186 aa17.66■□□□□ 0.42
RNF43-206ENST00000582293 APPL2Q8NEU8 664 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms