RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 SCN1AP35498 2009 aa23.11■■□□□ 1.29
CSNK1D-216ENST00000581108 STK25O00506 426 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 CPB1P15086 417 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 GAP43P17677 238 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 ADSSP30520 456 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 PDILTQ8N807 584 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 BEST2Q8NFU1 509 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 HVCN1Q96D96 273 aa23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 AFF4Q9UHB7 1163 aaKnown RBP23.1■■□□□ 1.29
CSNK1D-216ENST00000581108 IDEP14735 1019 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 LILRA4P59901 499 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 GPC5P78333 572 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 TMEM132DQ14C87 1099 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 FOXD4L5Q5VV16 416 aaPredicted RBP23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 C9orf57Q5W0N0 161 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 POTEHQ6S545 545 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 CRELD2Q6UXH1 353 aaPredicted RBP23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 MTSS1LQ765P7 747 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 USP37Q86T82 979 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 FOXD4L4Q8WXT5 416 aaPredicted RBP23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 POMGNT1Q8WZA1 660 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 ATOH1Q92858 354 aaPredicted RBP23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 MCRS1Q96EZ8 462 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 CORO1BQ9BR76 489 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 ASB7Q9H672 318 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 SLC2A4RGQ9NR83 387 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 DERAQ9Y315 318 aa23.09■■□□□ 1.29
CSNK1D-216ENST00000581108 PIRO00625 290 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 SPTLC1O15269 473 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 SPTLC2O15270 562 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 OR4Q2P0C623 313 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 CASP5P51878 434 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 SENP8Q96LD8 212 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 ACCSQ96QU6 501 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 KXD1Q9BQD3 176 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 RTP3Q9BQQ7 232 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 IRF2BPLQ9H1B7 796 aa23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 AVENQ9NQS1 362 aaPredicted RBP23.08■■□□□ 1.29
CSNK1D-216ENST00000581108 ANO9A1A5B4 782 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 GCNT3O95395 438 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 VNN2O95498 520 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 POSTNQ15063 836 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 L1TD1Q5T7N2 865 aaKnown RBP23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 OVOS1Q6IE37 1185 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 TCEAL4Q96EI5 215 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 ZNF396Q96N95 335 aaPredicted RBP23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 FGFBP2Q9BYJ0 223 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 OLFML3Q9NRN5 406 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 PANK4Q9NVE7 773 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 CEP72Q9P209 647 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 MAFFQ9ULX9 164 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 EXOC7Q9UPT5 735 aa23.07■■□□□ 1.28
CSNK1D-216ENST00000581108 TCHHQ07283 1943 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 CEBPBP17676 345 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 TYMPP19971 482 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 TWF1Q12792 350 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 PRSS36Q5K4E3 855 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 HS6ST3Q8IZP7 471 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 ZSWIM2Q8NEG5 633 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 PGLYRP2Q96PD5 576 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 OXCT2Q9BYC2 517 aaPredicted RBP23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 TBC1D17Q9HA65 648 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 ARHGEF3Q9NR81 526 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 DPP3Q9NY33 737 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 C2CD2Q9Y426 696 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 PCDHB13Q9Y5F0 798 aa23.06■■□□□ 1.28
CSNK1D-216ENST00000581108 USP34Q70CQ2 3546 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 FRMD3A2A2Y4 597 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 OR6C75A6NL08 312 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 NRG2O14511 850 aaPredicted RBP23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 PPP6R2O75170 966 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 RFX1P22670 979 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 CCR2P41597 374 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 POU5F1Q01860 360 aaKnown RBP23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 HSCBQ8IWL3 235 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 ZNF512Q96ME7 567 aaPredicted RBP23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 FAM213AQ9BRX8 229 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 CRISPLD1Q9H336 500 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 GDE1Q9NZC3 331 aa23.05■■□□□ 1.28
CSNK1D-216ENST00000581108 ZFHX2Q9C0A1 2572 aaPredicted RBP23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 TSC2P49815 1807 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 TULP1O00294 542 aaPredicted RBP23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 ODC1P11926 461 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 DUSP4Q13115 394 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 GPR17Q13304 367 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 FOXD4L6Q3SYB3 417 aaPredicted RBP23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 CYP4A22Q5TCH4 519 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 IQCEQ6IPM2 695 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 FOXD4L3Q6VB84 417 aaPredicted RBP23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 PDZD4Q76G19 769 aaPredicted RBP23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 EFCAB13Q8IY85 973 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 CCDC105Q8IYK2 499 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 SYCP3Q8IZU3 236 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 ELMOD1Q8N336 334 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 SAAL1Q96ER3 474 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 TMEM209Q96SK2 561 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 PLA2G2FQ9BZM2 168 aa23.04■■□□□ 1.28
CSNK1D-216ENST00000581108 ZNF197O14709 1029 aa23.03■■□□□ 1.28
CSNK1D-216ENST00000581108 YEATS4O95619 227 aa23.03■■□□□ 1.28
CSNK1D-216ENST00000581108 HSP90AA1P07900 732 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms