RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 TRIM14Q14142 442 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 WDR72Q3MJ13 1102 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 LRIT3Q3SXY7 679 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 EPC2Q52LR7 807 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 PPP2R2DQ66LE6 453 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 TMEM86AQ8N2M4 240 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 NEK11Q8NG66 645 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 TAS1R2Q8TE23 839 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 JAKMIP2Q96AA8 810 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 ERGIC2Q96RQ1 377 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 NUP58Q9BVL2 599 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 INTS2Q9H0H0 1204 aaKnown RBP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 GOLGA2P5Q9HBQ8 144 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 GDAP2Q9NXN4 497 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 SIX4Q9UIU6 781 aa12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNORD3C-201ENST00000580533 TMEM265A0A087WTH1 108 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 SYN3O14994 580 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 LPXNO60711 386 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 KIF4AO95239 1232 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 CA3P07451 260 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 BMPR1AP36894 532 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 SLC11A1P49279 550 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 RABGGTBP53611 331 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 MFAP3P55082 362 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 MYL6P60660 151 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 GCNT1Q02742 428 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 NR1I3Q14994 352 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 IGSF21Q96ID5 467 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 PBX4Q9BYU1 374 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 PRO3102Q9H379 93 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 CYP3A43Q9HB55 503 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 APEX2Q9UBZ4 518 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 DNAJB4Q9UDY4 337 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 LZTS1Q9Y250 596 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
SNORD3C-201ENST00000580533 C5orf67F2Z3F1 127 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 H7C4K7 107 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 CYB561D2O14569 222 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 VNN1O95497 513 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 TYMPP19971 482 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 LHX1P48742 406 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 SYCP1Q15431 976 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 USP41Q3LFD5 358 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 KIAA1841Q6NSI8 718 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 FUT10Q6P4F1 479 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 APTXQ7Z2E3 356 aaKnown RBP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 DDX53Q86TM3 631 aaKnown RBP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 GPR65Q8IYL9 337 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 THEM5Q8N1Q8 247 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 PPM1KQ8N3J5 372 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 ZNF397Q8NF99 534 aaPredicted RBP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 TIFAQ96CG3 184 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 MRFAP1L1Q96HT8 127 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 MMS19Q96T76 1030 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 CXCL16Q9H2A7 254 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 PCDHB8Q9UN66 801 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
SNORD3C-201ENST00000580533 M0QZQ0 153 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 TACC1O75410 805 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 FGF18O76093 207 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 URODP06132 367 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 CCDC172P0C7W6 258 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 DNAJB2P25686 324 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 PON1P27169 355 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 ERVK-21P61565 698 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 CUL2Q13617 745 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 SPECC1LQ69YQ0 1117 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 ANKS3Q6ZW76 656 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 CACNA2D4Q7Z3S7 1137 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 FBXO22Q8NEZ5 403 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 EDEM3Q9BZQ6 932 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 XYLT2Q9H1B5 865 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms