RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ELMOD1Q8N336 334 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 ITFG1Q8TB96 612 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 KIF12Q96FN5 646 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 NELL2Q99435 816 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 MSTO1Q9BUK6 570 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 BACH2Q9BYV9 841 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 TBC1D17Q9HA65 648 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 TRPV4Q9HBA0 871 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 DLGAP2Q9P1A6 1054 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 ASB3Q9Y575 518 aa15.75■□□□□ 0.11
SMARCE1-216ENST00000580419 OTOGLQ3ZCN5 2332 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 FRMD3A2A2Y4 597 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 LACTBL1A8MY62 500 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 H0Y858 1186 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 PIRO00625 290 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 MATR3P43243 847 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 MLLT6P55198 1093 aaPredicted RBP15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 LILRA4P59901 499 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 NTHL1P78549 312 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 DNASE1L2Q92874 299 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 E2F7Q96AV8 911 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 EPSTI1Q96J88 318 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 PHOX2BQ99453 314 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 CYP4F11Q9HBI6 524 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 DSEQ9UL01 958 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 POLIQ9UNA4 740 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 EXOC7Q9UPT5 735 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 SIT1Q9Y3P8 196 aa15.74■□□□□ 0.11
SMARCE1-216ENST00000580419 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 PI15O43692 258 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 GFRA3O60609 400 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 SEC24AO95486 1093 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 MYBP10242 640 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 TNFSF9P41273 254 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 NASPP49321 788 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 GPC5P78333 572 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 CYP4A22Q5TCH4 519 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 MAMSTRQ6ZN01 415 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 SV2BQ7L1I2 683 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 PJA1Q8NG27 643 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 DNAJC19Q96DA6 116 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 HCFC1R1Q9NWW0 138 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 CLIC4Q9Y696 253 aa15.73■□□□□ 0.11
SMARCE1-216ENST00000580419 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 IL18RAPO95256 599 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 FGF19O95750 216 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 ODC1P11926 461 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 GLULP15104 373 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 WEE1P30291 646 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 ADCY1Q08828 1119 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 TMEM132DQ14C87 1099 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 ANGPT1Q15389 498 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 SLC5A9Q2M3M2 681 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 SEZ6Q53EL9 994 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 RRAGBQ5VZM2 374 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 C9orf57Q5W0N0 161 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 USP37Q86T82 979 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 SPATA18Q8TC71 538 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 C2orf15Q8WU43 125 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 SNX21Q969T3 373 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 ZNF512Q96ME7 567 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 IER2Q9BTL4 223 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 RPP25Q9BUL9 199 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 CUEDC2Q9H467 287 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 ZMYM5Q9UJ78 669 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 MTMR6Q9Y217 621 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 PCDHB13Q9Y5F0 798 aa15.72■□□□□ 0.11
SMARCE1-216ENST00000580419 FRYLO94915 3013 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 TSC2P49815 1807 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 TCHHQ07283 1943 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 K7ELQ4 463 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 GARTP22102 1010 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 NMT1P30419 496 aaKnown RBP15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 MLF2Q15773 248 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 ZNF528Q3MIS6 628 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 SLC44A4Q53GD3 710 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 ADALQ6DHV7 355 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 OVOS1Q6IE37 1185 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 JADE1Q6IE81 842 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 CNNM4Q6P4Q7 775 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 C1orf228Q6PIY5 440 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 PDZD4Q76G19 769 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 DEPDC1BQ8WUY9 529 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 CLDN23Q96B33 292 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 ASB16Q96NS5 453 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 ZFP14Q9HCL3 533 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 ASAH2Q9NR71 780 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 CA14Q9ULX7 337 aa15.71■□□□□ 0.11
SMARCE1-216ENST00000580419 PRR23AA6NEV1 266 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 SOBPA7XYQ1 873 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 STX6O43752 255 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms