RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 TICRRQ7Z2Z1 1910 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 NCANO14594 1321 aa9.73□□□□□ -0.85
GGA3-207ENST00000578896 ANKRD63C9JTQ0 380 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 SPTLC1O15269 473 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 FAM13AO94988 1023 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 KRT18P05783 430 aaKnown RBP9.72□□□□□ -0.85
GGA3-207ENST00000578896 UBA7P41226 1012 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 PFKPQ01813 784 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 PRKCQQ04759 706 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 DUSP4Q13115 394 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 TEAD2Q15562 447 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 ZBTB6Q15916 424 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 ZC2HC1CQ53FD0 456 aaPredicted RBP9.72□□□□□ -0.85
GGA3-207ENST00000578896 STXBP5Q5T5C0 1151 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 CYP4A22Q5TCH4 519 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 ARL6IP4Q66PJ3 421 aaKnown RBP9.72□□□□□ -0.85
GGA3-207ENST00000578896 JADE1Q6IE81 842 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 SLC39A4Q6P5W5 647 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 TTC9BQ8N6N2 239 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 RASSF8Q8NHQ8 419 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 CALML4Q96GE6 196 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 HINFPQ9BQA5 517 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 MSTO1Q9BUK6 570 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 BCO2Q9BYV7 579 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 BRD9Q9H8M2 597 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 RPF1Q9H9Y2 349 aaKnown RBP9.72□□□□□ -0.85
GGA3-207ENST00000578896 ZFP14Q9HCL3 533 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 GDE1Q9NZC3 331 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
GGA3-207ENST00000578896 TBX20Q9UMR3 447 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 NDRG2Q9UN36 371 aaKnown RBP9.72□□□□□ -0.85
GGA3-207ENST00000578896 YIPF1Q9Y548 306 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 PATJQ8NI35 1801 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 TCHHQ07283 1943 aa9.72□□□□□ -0.85
GGA3-207ENST00000578896 CNOT1A5YKK6 2376 aaKnown RBP9.71□□□□□ -0.85
GGA3-207ENST00000578896 M0QZQ0 153 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ZNF197O14709 1029 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 LAMTOR5O43504 91 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 TRAK2O60296 914 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 FAM189A1O60320 539 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 NFICP08651 508 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 LRPAP1P30533 357 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 GDI1P31150 447 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ID4P47928 161 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ACOT2P49753 483 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 YWHAHQ04917 246 aaPredicted RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 PPP2R3AQ06190 1150 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 FZD5Q13467 585 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 SF3A1Q15459 793 aaKnown RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 TPGS2Q68CL5 300 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 IQCEQ6IPM2 695 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 FAM173BQ6P4H8 233 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 VITQ6UXI7 678 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 RTL10Q7L3V2 364 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ATAD1Q8NBU5 361 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 TTC8Q8TAM2 541 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 SHKBP1Q8TBC3 707 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ZSCAN18Q8TBC5 510 aaPredicted RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 RAD54LQ92698 747 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ELSPBP1Q96BH3 223 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 RSPRY1Q96DX4 576 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 EPSTI1Q96J88 318 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 FAM84AQ96KN4 292 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 SENP8Q96LD8 212 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ASB16Q96NS5 453 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 FIZ1Q96SL8 496 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 DNAJC25Q9H1X3 360 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 SLITRK6Q9H5Y7 841 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 PLEKHA5Q9HAU0 1116 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 AVENQ9NQS1 362 aaPredicted RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 UBQLN1Q9UMX0 589 aaKnown RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 CLIC4Q9Y696 253 aa9.71□□□□□ -0.86
GGA3-207ENST00000578896 ZNF638Q14966 1978 aaKnown RBP9.71□□□□□ -0.86
GGA3-207ENST00000578896 A0A0B4J269 797 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 A0A1W2PRU2 124 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 VPS37CA5D8V6 355 aaPredicted RBP9.7□□□□□ -0.86
GGA3-207ENST00000578896 OGTO15294 1046 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 OAZ2O95190 189 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 HOXC13P31276 330 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 SOX9P48436 509 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 AARSP49588 968 aaKnown RBP eCLIP9.7□□□□□ -0.86
GGA3-207ENST00000578896 ZNF131P52739 623 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 CEBPZQ03701 1054 aaKnown RBP9.7□□□□□ -0.86
GGA3-207ENST00000578896 MTAPQ13126 283 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 SPATA1Q5VX52 437 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 SCARA3Q6AZY7 606 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 ZNF852Q6ZMS4 543 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 DYMQ7RTS9 669 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 USP37Q86T82 979 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 TMC8Q8IU68 726 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 ELMOD1Q8N336 334 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 SUMF1Q8NBK3 374 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 ZSWIM2Q8NEG5 633 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 SMARCD2Q92925 531 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 RMDN1Q96DB5 314 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 CLIC6Q96NY7 704 aa9.7□□□□□ -0.86
GGA3-207ENST00000578896 TRMT61BQ9BVS5 477 aaKnown RBP9.7□□□□□ -0.86
GGA3-207ENST00000578896 LRRC3Q9BY71 257 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms