RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 C3orf62Q6ZUJ4 267 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 PRPF18Q99633 342 aaKnown RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RUBCNLQ9H714 662 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 MYL2P10916 166 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 SERPINB1P30740 379 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RUNX1T1Q06455 604 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 COG4Q9H9E3 785 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 DTNAQ9Y4J8 743 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 SLCO1B7G3V0H7 640 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 AKAP10O43572 662 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RBP3P10745 1247 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 KCNA2P16389 499 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 PDK1Q15118 436 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 ITGB1BP2Q9UKP3 347 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 MAGED2Q9UNF1 606 aaPredicted RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 AURKCQ9UQB9 309 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 KCNN4O15554 427 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 EFCAB14O75071 495 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 APBA3O96018 575 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 APRTP07741 180 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 THRAP10827 490 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 PTPN4P29074 926 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 KRT27Q7Z3Y8 459 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 ANKMY2Q8IV38 441 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 DDHD1Q8NEL9 900 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 ARL8AQ96BM9 186 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RXFP1Q9HBX9 757 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 PALMDQ9NP74 551 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 SCN3BQ9NY72 215 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 DLC1Q96QB1 1528 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RNF17Q9BXT8 1623 aaKnown RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 E5RI56 91 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 ANO4Q32M45 955 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 RBBP8NLQ8NC74 664 aaPredicted RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 OR6P1Q8NGX9 317 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 PHTF1Q9UMS5 762 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 LRCH1Q9Y2L9 728 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 COPG1Q9Y678 874 aaKnown RBP11.25□□□□□ -0.61
SEC22B-201ENST00000578049 TNPO2O14787 897 aaKnown RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 GLRA3O75311 464 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 FSBPO95073 299 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CYP2C8P10632 490 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 SLC9A1P19634 815 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 GRK2P25098 689 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 SCARF1Q14162 830 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 PLD3Q8IV08 490 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CCDC126Q96EE4 140 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 MED15Q96RN5 788 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 SIKE1Q9BRV8 207 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 TM9SF1O15321 606 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 SUPT3HO75486 399 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ENO3P13929 434 aaPredicted RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 DDIASQ8IXT1 998 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 RBBP8Q99708 897 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ZNF408Q9H9D4 720 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 RIC8BQ9NVN3 520 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ATP11BQ9Y2G3 1177 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CCDC78A2IDD5 438 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ACADSBP45954 432 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 MXD4Q14582 209 aaPredicted RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 KIF2BQ8N4N8 673 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 EPS8L2Q9H6S3 715 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 COL15A1P39059 1388 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CYP19A1P11511 503 aaPredicted RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 YWHABP31946 246 aaKnown RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 TTI2Q6NXR4 508 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CDC26Q8NHZ8 85 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 PGBD4Q96DM1 585 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 A8MXQ7 604 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 RBP5P82980 135 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 CENPPQ6IPU0 288 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 TTC23LQ6PF05 361 aa11.24□□□□□ -0.61
SEC22B-201ENST00000578049 PRPF39Q86UA1 669 aaKnown RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
SEC22B-201ENST00000578049 GTF2H1P32780 548 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 FDFT1P37268 417 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 RECQLP46063 649 aaPredicted RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 PGM2Q96G03 612 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms