RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 NSUN3Q9H649 340 aaKnown RBP6.16□□□□□ -1.42
CTNS-210ENST00000576979 KCNMB3Q9NPA1 279 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 CD320Q9NPF0 282 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 TYW1Q9NV66 732 aaKnown RBP6.16□□□□□ -1.42
CTNS-210ENST00000576979 INTUQ9ULD6 942 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 NFU1Q9UMS0 254 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 TRAF3IP3Q9Y228 551 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 AK5Q9Y6K8 562 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 RGPD3A6NKT7 1758 aaPredicted RBP6.16□□□□□ -1.42
CTNS-210ENST00000576979 RGPD4Q7Z3J3 1758 aa6.16□□□□□ -1.42
CTNS-210ENST00000576979 WDR81Q562E7 1941 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 SMCHD1A6NHR9 2005 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 A0A087X0T9 212 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 A0A0A6YYK5 440 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 NPHP3-ACAD11A0A0J9YXS1 232 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 FRMD3A2A2Y4 597 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PGRMC1O00264 195 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 NDUFAB1O14561 156 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 KCNK3O14649 394 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 EDIL3O43854 480 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 CEP104O60308 925 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 TLR2O60603 784 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 TOM1O60784 492 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PPP1R11O60927 126 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 MED24O75448 989 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ERLIN2O94905 339 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 GCNT3O95395 438 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 CPP00450 1065 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 RPLP1P05386 114 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 CCDC172P0C7W6 258 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 FAM228BP0C875 321 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 HSD3B2P26439 372 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 HMGB2P26583 209 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 SHMT1P34896 483 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 HSPA9P38646 679 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 USP8P40818 1118 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PRKCIP41743 596 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 STAT1P42224 750 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 CARSP49589 748 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 GUCY2FP51841 1108 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 SLC12A3P55017 1021 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 KRTAP10-2P60368 255 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 MRPS25P82663 173 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 GIT2Q14161 759 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 CLUL1Q15846 466 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PPP2R5EQ16537 467 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 KNOP1Q1ED39 458 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 Q4G0T1 1027 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PRR16Q569H4 304 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 TTMPQ5BVD1 217 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 HP1BP3Q5SSJ5 553 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ALKBH5Q6P6C2 394 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 USP17L6PQ6QN14 398 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 HHIPL2Q6UWX4 724 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 RUFY4Q6ZNE9 571 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PTF1AQ7RTS3 328 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PEX26Q7Z412 305 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 TADA2BQ86TJ2 420 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 SFR1Q86XK3 245 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 KLHL7Q8IXQ5 586 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 GJD3Q8N144 294 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 SYT2Q8N9I0 419 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 C1orf131Q8NDD1 294 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 CCDC26Q8TAB7 109 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ACTRT1Q8TDG2 376 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 CASKIN2Q8WXE0 1202 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 RELTQ969Z4 430 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ARL8AQ96BM9 186 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 KIRREL1Q96J84 757 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ATP6V1G3Q96LB4 118 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 FAM20AQ96MK3 541 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 INPP4AQ96PE3 977 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 AMNQ9BXJ7 453 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ZC3H12CQ9C0D7 883 aaKnown RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 ISCUQ9H1K1 167 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 TNKS2Q9H2K2 1166 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 TAF1DQ9H5J8 278 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 SLITRK6Q9H5Y7 841 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 EHMT1Q9H9B1 1298 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 KANSL2Q9H9L4 492 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 NYAP2Q9P242 653 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 POLLQ9UGP5 575 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 ADAMTS1Q9UHI8 967 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 DAAM1Q9Y4D1 1078 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PCDHA2Q9Y5H9 948 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 PCDHA1Q9Y5I3 950 aa6.15□□□□□ -1.42
CTNS-210ENST00000576979 COL11A2P13942 1736 aaPredicted RBP6.15□□□□□ -1.42
CTNS-210ENST00000576979 UBE4BO95155 1302 aa6.15□□□□□ -1.43
CTNS-210ENST00000576979 ATXN2Q99700 1313 aaKnown RBP6.15□□□□□ -1.43
CTNS-210ENST00000576979 ZNF646O15015 1829 aaPredicted RBP6.15□□□□□ -1.43
CTNS-210ENST00000576979 PSME4Q14997 1843 aa6.15□□□□□ -1.43
CTNS-210ENST00000576979 ZNFX1Q9P2E3 1918 aaKnown RBP6.15□□□□□ -1.43
CTNS-210ENST00000576979 GTPBP10A4D1E9 387 aaKnown RBP6.14□□□□□ -1.43
CTNS-210ENST00000576979 SRRM3A6NNA2 597 aaPredicted RBP6.14□□□□□ -1.43
CTNS-210ENST00000576979 GCOM1H8Y6P7 765 aaPredicted RBP6.14□□□□□ -1.43
CTNS-210ENST00000576979 EIF3DO15371 548 aaKnown RBP eCLIP6.14□□□□□ -1.43
CTNS-210ENST00000576979 RAD51CO43502 376 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms