RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 C16orf59Q7L2K0 433 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 CXorf38Q8TB03 319 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 BAP1Q92560 729 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 KAT5Q92993 513 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 FAXDC2Q96IV6 333 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 YME1L1Q96TA2 773 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.42
ERCC4-208ENST00000576348 NAA15Q9BXJ9 866 aaKnown RBP17.68■□□□□ 0.42
ERCC4-208ENST00000576348 DNAI2Q9GZS0 605 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 VRTNQ9H8Y1 702 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 POLIQ9UNA4 740 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 PCDHB4Q9Y5E5 795 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 SNX9Q9Y5X1 595 aa17.68■□□□□ 0.42
ERCC4-208ENST00000576348 KPNA7A9QM74 516 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 B3GAT3O94766 335 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 GFPT2O94808 682 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 FERP16591 822 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 CD58P19256 250 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 PAX3P23760 479 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 SOX5P35711 763 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 EPHB4P54760 987 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 ARID5BQ14865 1188 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 SCARA3Q6AZY7 606 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 DCLRE1AQ6PJP8 1040 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 GPIHBP1Q8IV16 184 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 TTC39CQ8N584 583 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 TC2NQ8N9U0 490 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 CCDC112Q8NEF3 446 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 JAKMIP2Q96AA8 810 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 KREMEN1Q96MU8 473 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 DNAJC7Q99615 494 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 CYP3A43Q9HB55 503 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 CACNG4Q9UBN1 327 aa17.67■□□□□ 0.42
ERCC4-208ENST00000576348 AJAP1Q9UKB5 411 aaPredicted RBP17.67■□□□□ 0.42
ERCC4-208ENST00000576348 PRG3Q9Y2Y8 225 aaPredicted RBP17.67■□□□□ 0.42
ERCC4-208ENST00000576348 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 RNF225M0QZC1 329 aaPredicted RBP17.66■□□□□ 0.42
ERCC4-208ENST00000576348 HUS1O60921 280 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 DGKIO75912 1065 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 WEE2P0C1S8 567 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 JAM2P57087 298 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 BTG3Q14201 252 aaPredicted RBP17.66■□□□□ 0.42
ERCC4-208ENST00000576348 NAB2Q15742 525 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 UPP1Q16831 310 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 ZNF280BQ86YH2 543 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 COLGALT2Q8IYK4 626 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 HERVK_113Q902F9 699 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 SYN2Q92777 582 aaPredicted RBP17.66■□□□□ 0.42
ERCC4-208ENST00000576348 SLC9A7Q96T83 725 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 ARID3AQ99856 593 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 COLEC11Q9BWP8 271 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 SMYD3Q9H7B4 428 aa17.66■□□□□ 0.42
ERCC4-208ENST00000576348 SCN5AQ14524 2016 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 CYB561D2O14569 222 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 TADA2AO75478 443 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 DDHD2O94830 711 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 ALDH2P05091 517 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 ASPAP45381 313 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 RAP1GAPP47736 663 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 LILRA4P59901 499 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 DSC1Q08554 894 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 KLHL30Q0D2K2 578 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 TDRD12Q587J7 1177 aaKnown RBP17.65■□□□□ 0.42
ERCC4-208ENST00000576348 TMEM270Q6UE05 265 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 TMCO2Q7Z6W1 182 aaPredicted RBP17.65■□□□□ 0.42
ERCC4-208ENST00000576348 METTL23Q86XA0 190 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 CMTR2Q8IYT2 770 aaKnown RBP17.65■□□□□ 0.42
ERCC4-208ENST00000576348 CRIPAKQ8N1N5 446 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 APPL2Q8NEU8 664 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 SHC3Q92529 594 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 BAG1Q99933 345 aaPredicted RBP17.65■□□□□ 0.42
ERCC4-208ENST00000576348 TMEM175Q9BSA9 504 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 SNX25Q9H3E2 840 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 NRDE2Q9H7Z3 1164 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 GDAP2Q9NXN4 497 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 FAN1Q9Y2M0 1017 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 RALGAPA2Q2PPJ7 1873 aa17.65■□□□□ 0.42
ERCC4-208ENST00000576348 FOXN3O00409 490 aaPredicted RBP17.64■□□□□ 0.41
ERCC4-208ENST00000576348 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 SERPING1P05155 500 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
ERCC4-208ENST00000576348 ODC1P11926 461 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 ATP2A2P16615 1042 aaKnown RBP17.64■□□□□ 0.41
ERCC4-208ENST00000576348 MAGEA10P43363 369 aaPredicted RBP17.64■□□□□ 0.41
ERCC4-208ENST00000576348 BPIFB4P59827 614 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 CYP26C1Q6V0L0 522 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 TMTC1Q8IUR5 882 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 LRRC8AQ8IWT6 810 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 HASPINQ8TF76 798 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 PAAF1Q9BRP4 392 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 BCO2Q9BYV7 579 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 DEF6Q9H4E7 631 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 CISHQ9NSE2 258 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 AIPL1Q9NZN9 384 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 DNAJB4Q9UDY4 337 aa17.64■□□□□ 0.41
ERCC4-208ENST00000576348 CARNS1A5YM72 827 aa17.63■□□□□ 0.41
ERCC4-208ENST00000576348 SPTLC1O15269 473 aa17.63■□□□□ 0.41
ERCC4-208ENST00000576348 KIF4AO95239 1232 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms