RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 UPP1Q16831 310 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 SFMBT2Q5VUG0 894 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 LRRC8AQ8IWT6 810 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 COLGALT2Q8IYK4 626 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 PHOSPHO2Q8TCD6 241 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 ZNF689Q96CS4 500 aaPredicted RBP12.77□□□□□ -0.37
PRPF8-212ENST00000575116 KREMEN1Q96MU8 473 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 TMEM175Q9BSA9 504 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 BCO2Q9BYV7 579 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
PRPF8-212ENST00000575116 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.37
PRPF8-212ENST00000575116 ZNHIT6Q9NWK9 470 aaKnown RBP12.77□□□□□ -0.37
PRPF8-212ENST00000575116 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
PRPF8-212ENST00000575116 LRRC53A6NM62 1247 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 F8VZ95 297 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 TMEM189-UBE2V1I3L0A0 370 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 NRDCO43847 1150 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 DDHD2O94830 711 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 UPP2O95045 317 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 FECHP22830 423 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
PRPF8-212ENST00000575116 SOX5P35711 763 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 CLCNKBP51801 687 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 LILRA4P59901 499 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 TNNC1P63316 161 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 CDK17Q00537 523 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 ARHGAP44Q17R89 818 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 HS1BP3Q53T59 392 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 CCDC112Q8NEF3 446 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 SHC3Q92529 594 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.373e-8■□□□□ 9.2
PRPF8-212ENST00000575116 GPR88Q9GZN0 384 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
PRPF8-212ENST00000575116 CNTN6Q9UQ52 1028 aa12.76□□□□□ -0.37
PRPF8-212ENST00000575116 BZW2Q9Y6E2 419 aaKnown RBP12.76□□□□□ -0.37
PRPF8-212ENST00000575116 FNDC1Q4ZHG4 1894 aaPredicted RBP12.76□□□□□ -0.37
PRPF8-212ENST00000575116 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 PPEF2O14830 753 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 TACC1O75410 805 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 CLSTN1O94985 981 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 ALDH2P05091 517 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 FERP16591 822 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 ASPAP45381 313 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 EPHB4P54760 987 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 BPIFB4P59827 614 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 DEFB103AP81534 67 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 MEA1Q16626 185 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 ZNF280BQ86YH2 543 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 TMTC1Q8IUR5 882 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 CMTR2Q8IYT2 770 aaKnown RBP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 TMEM130Q8N3G9 435 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 TOP6BLQ8N6T0 577 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 UBR7Q8N806 425 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 SPATA18Q8TC71 538 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 KAT5Q92993 513 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
PRPF8-212ENST00000575116 RC3H2Q9HBD1 1191 aaKnown RBP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 AJAP1Q9UKB5 411 aaPredicted RBP12.75□□□□□ -0.37
PRPF8-212ENST00000575116 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 B3GAT3O94766 335 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 SERPING1P05155 500 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 PRKCIP41743 596 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 HTRA4P83105 476 aaPredicted RBP12.74□□□□□ -0.37
PRPF8-212ENST00000575116 GOLGA8FQ08AF8 430 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 GOLGA8DPQ0D2H9 430 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 ASIC2Q16515 512 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 RASIP1Q5U651 963 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 WDR59Q6PJI9 974 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 IRF2BP2Q7Z5L9 587 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 APPL2Q8NEU8 664 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 ELMO3Q96BJ8 720 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 BAG1Q99933 345 aaPredicted RBP12.74□□□□□ -0.37
PRPF8-212ENST00000575116 COLEC11Q9BWP8 271 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 DNAI2Q9GZS0 605 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 SNX9Q9Y5X1 595 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
PRPF8-212ENST00000575116 SCN1AP35498 2009 aa12.73□□□□□ -0.37
PRPF8-212ENST00000575116 M0QZQ0 153 aa12.73□□□□□ -0.37
PRPF8-212ENST00000575116 CYB561D2O14569 222 aa12.73□□□□□ -0.37
PRPF8-212ENST00000575116 NRP1O14786 923 aa12.73□□□□□ -0.37
PRPF8-212ENST00000575116 SPTLC1O15269 473 aa12.73□□□□□ -0.37
PRPF8-212ENST00000575116 TRAPPC3O43617 180 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms