RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ZNF233A6NK53 670 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 ZMYND10O75800 440 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 DSTYKQ6XUX3 929 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 HS2ST1Q7LGA3 356 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 C12orf56Q8IXR9 622 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 APPL2Q8NEU8 664 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 BORCS6Q96GS4 357 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 SENP8Q96LD8 212 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 KCTD10Q9H3F6 313 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 EPHX3Q9H6B9 360 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 DPP7Q9UHL4 492 aa30.01■■■□□ 2.39
SCARF1-207ENST00000573867 SCN1AP35498 2009 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 WDR27A2RRH5 827 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 GOLGA6L4A6NEF3 574 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 GADD45BO75293 160 aaPredicted RBP30■■■□□ 2.39
SCARF1-207ENST00000573867 SNRPFP62306 86 aaKnown RBP30■■■□□ 2.39
SCARF1-207ENST00000573867 PNOCQ13519 176 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 CTXN3Q4LDR2 81 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 RDH13Q8NBN7 331 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 OR5B17Q8NGF7 314 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 GZF1Q9H116 711 aaPredicted RBP30■■■□□ 2.39
SCARF1-207ENST00000573867 ZDHHC7Q9NXF8 308 aa30■■■□□ 2.39
SCARF1-207ENST00000573867 TSC2P49815 1807 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 H7C4K7 107 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 C8AP07357 584 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 ANP32AP39687 249 aaKnown RBP29.99■■■□□ 2.39
SCARF1-207ENST00000573867 FAM160A1Q05DH4 1040 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 SNRNP35Q16560 246 aaKnown RBP29.99■■■□□ 2.39
SCARF1-207ENST00000573867 ZNF280DQ6N043 979 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 ELMSAN1Q6PJG2 1045 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 RNF135Q8IUD6 432 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 XXYLT1Q8NBI6 393 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 RHOBTB2Q9BYZ6 727 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 MTMR12Q9C0I1 747 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 CHMP5Q9NZZ3 219 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 SIX4Q9UIU6 781 aa29.99■■■□□ 2.39
SCARF1-207ENST00000573867 C2CD4DB7Z1M9 353 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 ABLIM3O94929 683 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 OAZ2O95190 189 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 ITGB3P05106 788 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 POLR2BP30876 1174 aaKnown RBP29.98■■■□□ 2.39
SCARF1-207ENST00000573867 ARPP19P56211 112 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 YWHAHQ04917 246 aaPredicted RBP29.98■■■□□ 2.39
SCARF1-207ENST00000573867 KCNB1Q14721 858 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 SLC7A14Q8TBB6 771 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 SMG7Q92540 1137 aaKnown RBP29.98■■■□□ 2.39
SCARF1-207ENST00000573867 PRKD2Q9BZL6 878 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 KIAA1586Q9HCI6 787 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 TSHZ2Q9NRE2 1034 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 INTS13Q9NVM9 706 aa29.98■■■□□ 2.39
SCARF1-207ENST00000573867 CGNQ9P2M7 1197 aaKnown RBP29.98■■■□□ 2.39
SCARF1-207ENST00000573867 TYMPP19971 482 aa29.97■■■□□ 2.39
SCARF1-207ENST00000573867 TAF6P49848 677 aa29.97■■■□□ 2.39
SCARF1-207ENST00000573867 LIN9Q5TKA1 542 aa29.97■■■□□ 2.39
SCARF1-207ENST00000573867 DMAC2Q9NW81 257 aa29.97■■■□□ 2.39
SCARF1-207ENST00000573867 AGAP1Q9UPQ3 857 aa29.97■■■□□ 2.39
SCARF1-207ENST00000573867 CYP24A1Q07973 514 aa29.96■■■□□ 2.39
SCARF1-207ENST00000573867 ZNF461Q8TAF7 563 aa29.96■■■□□ 2.39
SCARF1-207ENST00000573867 ERCC4Q92889 916 aaPredicted RBP29.96■■■□□ 2.39
SCARF1-207ENST00000573867 MUTYHQ9UIF7 546 aa29.96■■■□□ 2.39
SCARF1-207ENST00000573867 MAPK8IP1Q9UQF2 711 aa29.96■■■□□ 2.39
SCARF1-207ENST00000573867 PI4K2BG5E9Z4 385 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 SEC24AO95486 1093 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 CYP11A1P05108 521 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 OR4Q2P0C623 313 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 ODC1P11926 461 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 PAX3P23760 479 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 PSMD6Q15008 389 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 CYP26C1Q6V0L0 522 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 PLEKHO2Q8TD55 490 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 CACTINQ8WUQ7 758 aaKnown RBP29.95■■■□□ 2.39
SCARF1-207ENST00000573867 TMEM209Q96SK2 561 aa29.95■■■□□ 2.39
SCARF1-207ENST00000573867 WDR6Q9NNW5 1121 aaKnown RBP29.95■■■□□ 2.39
SCARF1-207ENST00000573867 TRIOO75962 3097 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 CYB561D2O14569 222 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 CCL16O15467 120 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 N4BP1O75113 896 aaKnown RBP29.94■■■□□ 2.38
SCARF1-207ENST00000573867 VNN2O95498 520 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 TMEM191BP0C7N4 346 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 PPM1LQ5SGD2 360 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 OVOS1Q6IE37 1185 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 CCDC149Q6ZUS6 474 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 CSGALNACT2Q8N6G5 542 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 GOLGA5Q8TBA6 731 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 CCDC47Q96A33 483 aaKnown RBP29.94■■■□□ 2.38
SCARF1-207ENST00000573867 RTP3Q9BQQ7 232 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 ITGA11Q9UKX5 1188 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 CLUHO75153 1309 aa29.94■■■□□ 2.38
SCARF1-207ENST00000573867 KPNA7A9QM74 516 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 PDXKO00764 312 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 EXOC3O60645 756 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 HNRNPA1P09651 372 aaKnown RBP eCLIP29.93■■■□□ 2.38
SCARF1-207ENST00000573867 ATF2P15336 505 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 HOXA9P31269 272 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 SURF1Q15526 300 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 RNF19BQ6ZMZ0 732 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 USP37Q86T82 979 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 WDR49Q8IV35 697 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 SLC9A9Q8IVB4 645 aa29.93■■■□□ 2.38
SCARF1-207ENST00000573867 SMYD4Q8IYR2 804 aaPredicted RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms