RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PNOCQ13519 176 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 MRPL58Q14197 206 aaKnown RBP22.34■■□□□ 1.17
CHMP6-204ENST00000572778 SURF1Q15526 300 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 LMBRD2Q68DH5 695 aaPredicted RBP22.34■■□□□ 1.17
CHMP6-204ENST00000572778 SLC8B1Q6J4K2 584 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 C15orf39Q6ZRI6 1047 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 CMASQ8NFW8 434 aaPredicted RBP22.34■■□□□ 1.17
CHMP6-204ENST00000572778 FAM84AQ96KN4 292 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 FBXL5Q9UKA1 691 aa22.34■■□□□ 1.17
CHMP6-204ENST00000572778 EXOC3O60645 756 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 GADD45BO75293 160 aaPredicted RBP22.33■■□□□ 1.17
CHMP6-204ENST00000572778 KIF20AO95235 890 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 ITGB3P05106 788 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 ODC1P11926 461 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 POLR2BP30876 1174 aaKnown RBP22.33■■□□□ 1.17
CHMP6-204ENST00000572778 TAF6P49848 677 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 ROR1Q01973 937 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 KCNB1Q14721 858 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 C12orf56Q8IXR9 622 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 C1orf127Q8N9H9 656 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 ANKRD36BP1Q96IX9 119 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 MTMR12Q9C0I1 747 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 PIDD1Q9HB75 910 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 ZDHHC7Q9NXF8 308 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 AGAP1Q9UPQ3 857 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 MAPK8IP1Q9UQF2 711 aa22.33■■□□□ 1.17
CHMP6-204ENST00000572778 TBC1D4O60343 1298 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 ZMYND10O75800 440 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 C8AP07357 584 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 KRT19P08727 400 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 PPM1LQ5SGD2 360 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 CSGALNACT2Q8N6G5 542 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 SMG7Q92540 1137 aaKnown RBP22.32■■□□□ 1.16
CHMP6-204ENST00000572778 CCDC127Q96BQ5 260 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 ZNF560Q96MR9 790 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 FNBP1Q96RU3 617 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 KCTD10Q9H3F6 313 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 INTS13Q9NVM9 706 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 TTC28Q96AY4 2481 aa22.32■■□□□ 1.16
CHMP6-204ENST00000572778 PDCD11Q14690 1871 aaKnown RBP22.31■■□□□ 1.16
CHMP6-204ENST00000572778 ARHGEF37A1IGU5 675 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 WDR27A2RRH5 827 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 LOC730098B7Z3J9 87 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 PDXKO00764 312 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 CYB561D2O14569 222 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 TNNC2P02585 160 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 DLATP10515 647 aaKnown RBP22.31■■□□□ 1.16
CHMP6-204ENST00000572778 TYMPP19971 482 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 ELF1P32519 619 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 SV2CQ496J9 727 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 OVOS1Q6IE37 1185 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 CYP26C1Q6V0L0 522 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 ZNF461Q8TAF7 563 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 SLC7A14Q8TBB6 771 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 ZNF707Q96C28 371 aaPredicted RBP22.31■■□□□ 1.16
CHMP6-204ENST00000572778 TIGD1Q96MW7 591 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 PRKD2Q9BZL6 878 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 HOOK1Q9UJC3 728 aaKnown RBP22.31■■□□□ 1.16
CHMP6-204ENST00000572778 ITGA11Q9UKX5 1188 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 R3HCC1Q9Y3T6 440 aaKnown RBP22.31■■□□□ 1.16
CHMP6-204ENST00000572778 NR2E1Q9Y466 385 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 PTPRJQ12913 1337 aa22.31■■□□□ 1.16
CHMP6-204ENST00000572778 KPNA7A9QM74 516 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 KINO60870 393 aaKnown RBP22.3■■□□□ 1.16
CHMP6-204ENST00000572778 OAZ2O95190 189 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 CPB1P15086 417 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 TNNI1P19237 187 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 PNPLA4P41247 253 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 RBP5P82980 135 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 CYP24A1Q07973 514 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 PSMD6Q15008 389 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 DUOXA2Q1HG44 320 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 CCDC149Q6ZUS6 474 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 RNF135Q8IUD6 432 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 WDR49Q8IV35 697 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 OR5B17Q8NGF7 314 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 ERCC4Q92889 916 aaPredicted RBP22.3■■□□□ 1.16
CHMP6-204ENST00000572778 KHSRPQ92945 711 aaKnown RBP eCLIP22.3■■□□□ 1.16
CHMP6-204ENST00000572778 RMND1Q9NWS8 449 aa22.3■■□□□ 1.16
CHMP6-204ENST00000572778 VWA8A3KMH1 1905 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 PLXNA3P51805 1871 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 CCL16O15467 120 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 CALUO43852 315 aaPredicted RBP22.29■■□□□ 1.16
CHMP6-204ENST00000572778 ABLIM3O94929 683 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 SMC2O95347 1197 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 BFSP1Q12934 665 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 UVSSAQ2YD98 709 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 SCARA3Q6AZY7 606 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 METTL23Q86XA0 190 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 GUF1Q8N442 669 aaKnown RBP22.29■■□□□ 1.16
CHMP6-204ENST00000572778 SMARCE1Q969G3 411 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 BORCS6Q96GS4 357 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 OXCT2Q9BYC2 517 aaPredicted RBP22.29■■□□□ 1.16
CHMP6-204ENST00000572778 RHOBTB2Q9BYZ6 727 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 DMAC2Q9NW81 257 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 DSEQ9UL01 958 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 POLIQ9UNA4 740 aa22.29■■□□□ 1.16
CHMP6-204ENST00000572778 C2CD4DB7Z1M9 353 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 PRRG1O14668 218 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms