RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 USP41Q3LFD5 358 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 TIGD5Q53EQ6 642 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 Q7L0L9 218 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 IRF2BP1Q8IU81 584 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 HERC2P3Q9BVR0 1158 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 GPR62Q9BZJ7 368 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 CBX8Q9HC52 389 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 SIX4Q9UIU6 781 aa15.62■□□□□ 0.09
NPLOC4-209ENST00000572760 KPNA7A9QM74 516 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 IGFBP4P22692 258 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 ATICP31939 592 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 FMO5P49326 533 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 GLUD2P49448 558 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 ZNF445P59923 1031 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 MYL6P60660 151 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 TNNC1P63316 161 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 MYL7Q01449 175 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 NCAPHQ15003 741 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 MAN2A1Q16706 1144 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 ZNF699Q32M78 642 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 TCP11X2Q5H9J9 407 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 PLPP4Q5VZY2 271 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 CD300LGQ6UXG3 332 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 DHX40Q8IX18 779 aaKnown RBP15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 DEFB123Q8N688 67 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 FBXL13Q8NEE6 735 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 APPL2Q8NEU8 664 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 FAM200AQ8TCP9 573 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 SUSD3Q96L08 255 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 SENP8Q96LD8 212 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 TCF25Q9BQ70 676 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 TUBGCP2Q9BSJ2 902 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 TTPALQ9BTX7 342 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 SSX2IPQ9Y2D8 614 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 SNX9Q9Y5X1 595 aa15.61■□□□□ 0.09
NPLOC4-209ENST00000572760 C2CD2LO14523 706 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 CYB561D2O14569 222 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 SYN3O14994 580 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 HUS1O60921 280 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 CXCL14O95715 111 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 CTSAP10619 480 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 ODC1P11926 461 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 DNAJB1P25685 340 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 MCCD1P59942 119 aaPredicted RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 ERVFC1P60507 584 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 SMC1AQ14683 1233 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 IQCB1Q15051 598 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 SGSM1Q2NKQ1 1148 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 ZNF667Q5HYK9 610 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 CDKAL1Q5VV42 579 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 PDE12Q6L8Q7 609 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 C15orf39Q6ZRI6 1047 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 TAS1R1Q7RTX1 841 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 METTL23Q86XA0 190 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 TAS1R2Q8TE23 839 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 RIN2Q8WYP3 895 aaPredicted RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 B3GALT6Q96L58 329 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 VN1R3Q9BXE9 311 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 ZBP1Q9H171 429 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 NGRNQ9NPE2 291 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 MRPL17Q9NRX2 175 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 NXF1Q9UBU9 619 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 MYH10P35580 1976 aa15.6■□□□□ 0.09
NPLOC4-209ENST00000572760 MTCL1Q9Y4B5 1905 aaKnown RBP15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 M0QZQ0 153 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 SPTLC1O15269 473 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 P4HA2O15460 535 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 VNN1O95497 513 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 P4HA1P13674 534 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 FGFR3P22607 806 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 TKTP29401 623 aaKnown RBP15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 AARSP49588 968 aaKnown RBP eCLIP15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 WDR72Q3MJ13 1102 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 CBWD6Q4V339 395 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 VWA3BQ502W6 1294 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 WDR44Q5JSH3 913 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 CBWD3Q5JTY5 395 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 CBWD5Q5RIA9 395 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 SCARA3Q6AZY7 606 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 PDXDC1Q6P996 788 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 LUZP1Q86V48 1076 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 CXorf38Q8TB03 319 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 TAF4BQ92750 862 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 PPP2R3CQ969Q6 453 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 MRPL38Q96DV4 380 aaKnown RBP15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 MMS19Q96T76 1030 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 VPS16Q9H269 839 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.59■□□□□ 0.091e-42■■■■■ 63.9
NPLOC4-209ENST00000572760 RAB20Q9NX57 234 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 TAB2Q9NYJ8 693 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 LMCD1Q9NZU5 365 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 DSEQ9UL01 958 aa15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 TIMM13Q9Y5L4 95 aaPredicted RBP15.59■□□□□ 0.09
NPLOC4-209ENST00000572760 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.58■□□□□ 0.08
NPLOC4-209ENST00000572760 H7C4K7 107 aa15.58■□□□□ 0.08
NPLOC4-209ENST00000572760 STAU1O95793 577 aaKnown RBP15.58■□□□□ 0.08
NPLOC4-209ENST00000572760 IRS1P35568 1242 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms