RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 EP400NLQ6ZTU2 488 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 SPATA31D4Q6ZUB0 917 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 OSTM1Q86WC4 334 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 C12orf76Q8N812 135 aaPredicted RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 PIK3R5Q8WYR1 880 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 CCDC47Q96A33 483 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 SENP8Q96LD8 212 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 RTP3Q9BQQ7 232 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 APOL5Q9BWW9 433 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 NUP62CLQ9H1M0 184 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 MRPL17Q9NRX2 175 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 RMND1Q9NWS8 449 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 TMEM63CQ9P1W3 806 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 CGNQ9P2M7 1197 aaKnown RBP7.55□□□□□ -1.2
SMG6-209ENST00000571442 AGAP1Q9UPQ3 857 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 CTNND2Q9UQB3 1225 aa7.55□□□□□ -1.2
SMG6-209ENST00000571442 NOTCH4Q99466 2003 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 TGM5O43548 720 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 KRT19P08727 400 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 WEE2P0C1S8 567 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 OR4Q2P0C623 313 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 IL9P15248 144 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
SMG6-209ENST00000571442 CLDN10P78369 228 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 PPP3CAQ08209 521 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 MYBPC2Q14324 1141 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 EDRF1Q3B7T1 1238 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
SMG6-209ENST00000571442 WSCD1Q658N2 575 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 ANKRD54Q6NXT1 300 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 LILRA6Q6PI73 481 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 TMEM184AQ6ZMB5 413 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
SMG6-209ENST00000571442 TRAPPC11Q7Z392 1133 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 PALB2Q86YC2 1186 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 CSGALNACT2Q8N6G5 542 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 OR10T2Q8NGX3 314 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 GOLGA5Q8TBA6 731 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 NELFBQ8WX92 580 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 HLA-CQ95604 372 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 CCDC34Q96HJ3 373 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 NECAB3Q96P71 396 aaPredicted RBP7.54□□□□□ -1.2
SMG6-209ENST00000571442 TSPAN18Q96SJ8 248 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 XYLT2Q9H1B5 865 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 S1PR5Q9H228 398 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 KIAA1586Q9HCI6 787 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 FNIP2Q9P278 1114 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 FBXL5Q9UKA1 691 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 PCDHB8Q9UN66 801 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 NUB1Q9Y5A7 615 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 CDY1Q9Y6F8 540 aa7.54□□□□□ -1.2
SMG6-209ENST00000571442 DENND4AQ7Z401 1863 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 WDR27A2RRH5 827 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 NRG2O14511 850 aaPredicted RBP7.53□□□□□ -1.2
SMG6-209ENST00000571442 CYB561D2O14569 222 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 SYN3O14994 580 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 MBTPS2O43462 519 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 XPOTO43592 962 aaKnown RBP7.53□□□□□ -1.2
SMG6-209ENST00000571442 RFPL2O75678 378 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 SEC24AO95486 1093 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 TMEM191BP0C7N4 346 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 BMP1P13497 986 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 TNNI1P19237 187 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 COL9A1P20849 921 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 KLRC2P26717 231 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 OR1D2P34982 312 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 NDUFV1P49821 464 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 TAF6P49848 677 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 MYL6P60660 151 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 ROR1Q01973 937 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 ELAVL2Q12926 359 aaKnown RBP7.53□□□□□ -1.2
SMG6-209ENST00000571442 BFSP1Q12934 665 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 LEXMQ3ZCV2 418 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 SPOPLQ6IQ16 392 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 SLC8B1Q6J4K2 584 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 KIAA1841Q6NSI8 718 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 DSTYKQ6XUX3 929 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 C15orf39Q6ZRI6 1047 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 LIMS2Q7Z4I7 341 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 LRRTM3Q86VH5 581 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 GPR65Q8IYL9 337 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 FAM186BQ8IYM0 893 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 TRIML1Q8N9V2 468 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 TMC2Q8TDI7 906 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 SEMA4DQ92854 862 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 DHTKD1Q96HY7 919 aaPredicted RBP7.53□□□□□ -1.2
SMG6-209ENST00000571442 ANKRD36BP1Q96IX9 119 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 FNBP1Q96RU3 617 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 CDCA3Q99618 268 aaPredicted RBP7.53□□□□□ -1.2
SMG6-209ENST00000571442 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 PI4K2AQ9BTU6 479 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms