RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 STAT2P52630 851 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 MRPL12P52815 198 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 RPL11P62913 178 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 DEFB103AP81534 67 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 NFKB2Q00653 900 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 IKQ13123 557 aaPredicted RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 LSAMPQ13449 338 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 GPNMBQ14956 572 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 UBE3CQ15386 1083 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 SMAD2Q15796 467 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 SLFN13Q68D06 897 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 CDCA2Q69YH5 1023 aaPredicted RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 ZSCAN25Q6NSZ9 544 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 ZCCHC8Q6NZY4 707 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 UBE2R2Q712K3 238 aaPredicted RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 TMCO2Q7Z6W1 182 aaPredicted RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 VSIG10LQ86VR7 867 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 CLASRPQ8N2M8 674 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 FLCNQ8NFG4 579 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 FRAT1Q92837 279 aaPredicted RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 JMJD8Q96S16 334 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 NSUN3Q9H649 340 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 CLDND1Q9NY35 253 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 MTMR4Q9NYA4 1195 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
UBFD1-209ENST00000569919 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 XIRP2A4UGR9 3374 aa6.98□□□□□ -1.29
UBFD1-209ENST00000569919 IGKV6D-41A0A0C4DH26 115 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 TMEM221A6NGB7 291 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 M0R296 226 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 AMHP03971 560 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 SOD2P04179 222 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 IFIT2P09913 472 aaKnown RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 KIR2DL1P43626 348 aaPredicted RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 KIR2DL2P43627 348 aaPredicted RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 ALDH5A1P51649 535 aaPredicted RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 GPM6BQ13491 265 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 EPC2Q52LR7 807 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 TCEAL5Q5H9L2 206 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 MUM1L1Q5H9M0 696 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 PIK3R6Q5UE93 754 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 PKN3Q6P5Z2 889 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 CEP128Q6ZU80 1094 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 LRRC8DQ7L1W4 858 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 DDX53Q86TM3 631 aaKnown RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 SLCO6A1Q86UG4 719 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 SESTD1Q86VW0 696 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 SCFD2Q8WU76 684 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 ANKS1AQ92625 1134 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 C17orf80Q9BSJ5 609 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 IPPKQ9H8X2 491 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 PAG1Q9NWQ8 432 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 GULP1Q9UBP9 304 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 MUTYHQ9UIF7 546 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 ATP8A1Q9Y2Q0 1164 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 COQ6Q9Y2Z9 468 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 ZBED9Q6R2W3 1325 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 TET1Q8NFU7 2136 aa6.97□□□□□ -1.29
UBFD1-209ENST00000569919 TRIP12Q14669 1992 aaPredicted RBP6.97□□□□□ -1.29
UBFD1-209ENST00000569919 KIAA1324LA8MWY0 1029 aaPredicted RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 MBTPS2O43462 519 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 NBNO60934 754 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 NPTXRO95502 500 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CKMP06732 381 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 TXNP10599 105 aaKnown RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CKBP12277 381 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CASTP20810 708 aaKnown RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 GRK2P25098 689 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 GRK3P35626 688 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 SLC1A4P43007 532 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 HK2P52789 917 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 TCF15Q12870 199 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 BAATQ14032 418 aaPredicted RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 PPP2R5BQ15173 497 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 NFXL1Q6ZNB6 911 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CEP68Q76N32 757 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 STRA8Q7Z7C7 330 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 TMEM57Q8N5G2 664 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 IGSF22Q8N9C0 903 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 ATOH1Q92858 354 aaPredicted RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CEP95Q96GE4 821 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 TMEM169Q96HH4 297 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 IL1RAPL2Q9NP60 686 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 CCPG1Q9ULG6 757 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 DDX49Q9Y6V7 483 aaKnown RBP6.96□□□□□ -1.3
UBFD1-209ENST00000569919 BRWD1Q9NSI6 2320 aa6.96□□□□□ -1.3
UBFD1-209ENST00000569919 FAM47E-STBD1D6RA91 191 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 PROB1E7EW31 1015 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 WNT9AO14904 365 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 ICAM1P05362 532 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 RB1P06400 928 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 TSPY3P0CV98 308 aa6.95□□□□□ -1.3
UBFD1-209ENST00000569919 TSPY8P0CW00 308 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms