RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 MRE11P49959 708 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 GATMP50440 423 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 HTRA4P83105 476 aaPredicted RBP11.25□□□□□ -0.61
CDH3-210ENST00000569117 CETN1Q12798 172 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 TUSC3Q13454 348 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 NCOA4Q13772 614 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 NR1I3Q14994 352 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 HERC6Q8IVU3 1022 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 LRRC52Q8N7C0 313 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 FBXL13Q8NEE6 735 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 TAS1R2Q8TE23 839 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
CDH3-210ENST00000569117 UROC1Q96N76 676 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 NAP1L5Q96NT1 182 aaPredicted RBP11.25□□□□□ -0.61
CDH3-210ENST00000569117 GOLGA2P5Q9HBQ8 144 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 DPP3Q9NY33 737 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 GCNT4Q9P109 453 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 SIX4Q9UIU6 781 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 ANO9A1A5B4 782 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 TBKBP1A7MCY6 615 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 TEX33O43247 280 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 ATP9BO43861 1147 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 B4GALT3O60512 393 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 STAU1O95793 577 aaKnown RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 ASS1P00966 412 aaKnown RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 HLA-DRAP01903 254 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 POLR2BP30876 1174 aaKnown RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 PBX1P40424 430 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 UBXN1Q04323 297 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 RNASELQ05823 741 aaKnown RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 SYCP1Q15431 976 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 C9orf57Q5W0N0 161 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 LMO3Q8TAP4 145 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 MRFAP1L1Q96HT8 127 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 ZNF560Q96MR9 790 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 YME1L1Q96TA2 773 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 TRIM5Q9C035 493 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 UBE2OQ9C0C9 1292 aaKnown RBP11.24□□□□□ -0.61
CDH3-210ENST00000569117 RAB20Q9NX57 234 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 SIK3Q9Y2K2 1263 aa11.24□□□□□ -0.61
CDH3-210ENST00000569117 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 TMEM189-UBE2V1I3L0A0 370 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 PIRO00625 290 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 ZC3H11AO75152 810 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDH3-210ENST00000569117 PHACTR2O75167 634 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 DDHD2O94830 711 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 ATICP31939 592 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 RPL9P32969 192 aaKnown RBP11.23□□□□□ -0.61
CDH3-210ENST00000569117 BMP8BP34820 402 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 PNPLA4P41247 253 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 ZNF75DP51815 510 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
CDH3-210ENST00000569117 RBP5P82980 135 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 TRPC3Q13507 836 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 SHHQ15465 462 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 UPP1Q16831 310 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
CDH3-210ENST00000569117 FAM117BQ6P1L5 589 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 COLGALT2Q8IYK4 626 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 TMEM130Q8N3G9 435 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 TAF4BQ92750 862 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 TMEM175Q9BSA9 504 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 CRACR2AQ9BSW2 395 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 IMPG2Q9BZV3 1241 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
CDH3-210ENST00000569117 XYLT2Q9H1B5 865 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 INSL6Q9Y581 213 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 ITIH6Q6UXX5 1313 aa11.23□□□□□ -0.61
CDH3-210ENST00000569117 PODXLO00592 558 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 PPEF2O14830 753 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 CST3P01034 146 aaPredicted RBP11.22□□□□□ -0.61
CDH3-210ENST00000569117 KRT19P08727 400 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 PON1P27169 355 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 CDC25BP30305 580 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 CLCNKBP51801 687 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 MYL6P60660 151 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 KCNMA1Q12791 1236 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 BTG3Q14201 252 aaPredicted RBP11.22□□□□□ -0.61
CDH3-210ENST00000569117 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 ZNF699Q32M78 642 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 SV2CQ496J9 727 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 SCARA3Q6AZY7 606 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 ZNF280BQ86YH2 543 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 FAM193BQ96PV7 902 aaPredicted RBP11.22□□□□□ -0.61
CDH3-210ENST00000569117 RAD9AQ99638 391 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 PAAF1Q9BRP4 392 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms