RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	SLITRK6	Q9H5Y7	841 aa		14.18	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TUT1	Q9H6E5	874 aa	Known RBP	14.18	□□□□□ -0.14
ZNRF1-208	ENST00000568494	RPF1	Q9H9Y2	349 aa	Known RBP	14.18	□□□□□ -0.14
ZNRF1-208	ENST00000568494	AVEN	Q9NQS1	362 aa	Predicted RBP	14.18	□□□□□ -0.14
ZNRF1-208	ENST00000568494	AMACR	Q9UHK6	382 aa		14.18	□□□□□ -0.14
ZNRF1-208	ENST00000568494	BRCA2	P51587	3418 aa		14.18	□□□□□ -0.14
ZNRF1-208	ENST00000568494	AGPS	O00116	658 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	B4GALT4	O60513	344 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TNNC2	P02585	160 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MMP3	P08254	477 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TMEM191B	P0C7N4	346 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CXCL8	P10145	99 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MYBL1	P10243	752 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MAPK4	P31152	587 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	LACTB	P83111	547 aa	Predicted RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	POU5F1	Q01860	360 aa	Known RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TRIM72	Q6ZMU5	477 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MON1B	Q7L1V2	547 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TMEM130	Q8N3G9	435 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	EXOC4	Q96A65	974 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CPB2	Q96IY4	423 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	NAP1L3	Q99457	506 aa	Predicted RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TRIM7	Q9C029	511 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ERVK-5	Q9HDB9	667 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PSD3	Q9NYI0	1048 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	FAN1	Q9Y2M0	1017 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PCDHA3	Q9Y5H8	950 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MROH7	Q68CQ1	1323 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	COL1A2	P08123	1366 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	SLC15A5	A6NIM6	579 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	LACTBL1	A8MY62	500 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MEFV	O15553	781 aa	Predicted RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ADCY6	O43306	1168 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	STAG3L1	P0CL83	205 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PYGM	P11217	842 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CD58	P19256	250 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TMOD1	P28289	359 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CTNNA1	P35221	906 aa	Known RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	GGCX	P38435	758 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	GUCY2F	P51841	1108 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	NOMO3	P69849	1222 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PPFIA1	Q13136	1202 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	NNT	Q13423	1086 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	HSP90B2P	Q58FF3	399 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MARCH8	Q5T0T0	291 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	IQSEC1	Q6DN90	963 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	DDX42	Q86XP3	938 aa	Known RBP eCLIP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CCDC26	Q8TAB7	109 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	FAM71B	Q8TC56	605 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ZNF296	Q8WUU4	475 aa	Predicted RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TRIM11	Q96F44	468 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ANKRD36BP1	Q96IX9	119 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	C11orf70	Q9BRQ4	267 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CELF4	Q9BZC1	486 aa	Known RBP	14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	NIF3L1	Q9GZT8	377 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ABHD16B	Q9H3Z7	469 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PDZD7	Q9H5P4	517 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	VPS18	Q9P253	973 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ANAPC7	Q9UJX3	599 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CASP8AP2	Q9UKL3	1982 aa		14.17	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TTI1	O43156	1089 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	WEE2	P0C1S8	567 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PSMC4	P43686	418 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	GRIK4	Q16099	956 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ZNF699	Q32M78	642 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PRAMEF19	Q5SWL8	479 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ZNF606	Q8WXB4	792 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	RIN2	Q8WYP3	895 aa	Predicted RBP	14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	XYLT2	Q9H1B5	865 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MED4	Q9NPJ6	270 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CISH	Q9NSE2	258 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	POLI	Q9UNA4	740 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	EVPL	Q92817	2033 aa		14.16	□□□□□ -0.14
ZNRF1-208	ENST00000568494	IL18RAP	O95256	599 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	NFIC	P08651	508 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MCF2	P10911	925 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	HOXD8	P13378	290 aa	Predicted RBP	14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	TNFAIP2	Q03169	654 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	SEL1L2	Q5TEA6	688 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	LIN9	Q5TKA1	542 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	SCARA5	Q6ZMJ2	495 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	MAATS1	Q7Z4T9	603 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PHF13	Q86YI8	300 aa	Predicted RBP	14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ZDHHC14	Q8IZN3	488 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CD99L2	Q8TCZ2	262 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	NLRP7	Q8WX94	980 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ADAM22	Q9P0K1	906 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ADAM21	Q9UKJ8	722 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	GOLGA6B	A6NDN3	693 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ZEB2	O60315	1214 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	KRT19	P08727	400 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ARF4	P18085	180 aa	Predicted RBP	14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	BRD2	P25440	801 aa	Known RBP	14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ECHS1	P30084	290 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ASPA	P45381	313 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	PTP4A2	Q12974	167 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	CLUL1	Q15846	466 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	DGKD	Q16760	1214 aa		14.15	□□□□□ -0.14
ZNRF1-208	ENST00000568494	ZNF394	Q53GI3	561 aa		14.15	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms