RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 UBE2Q1Q7Z7E8 422 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 FAM178BQ8IXR5 827 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 NME8Q8N427 588 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 SMG8Q8ND04 991 aaKnown RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 SPATA20Q8TB22 786 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 TCF12Q99081 682 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 FDXACB1Q9BRP7 624 aaPredicted RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 FGFBP2Q9BYJ0 223 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
SMG1-214ENST00000568038 C17orf75Q9HAS0 396 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 RMND1Q9NWS8 449 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 SEL1LQ9UBV2 794 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 HIF3AQ9Y2N7 669 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 GDAQ9Y2T3 454 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 CDY2AQ9Y6F7 541 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 ADGRA3Q8IWK6 1321 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 MYH11P35749 1972 aa8.5□□□□□ -1.05
SMG1-214ENST00000568038 HTTP42858 3142 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 SYCE3A1L190 88 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 INO80B-WBP1J3KQ70 363 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 GPR32O75388 356 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 PRPF6O94906 941 aaKnown RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 GCNT3O95395 438 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 CHRNA1P02708 482 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 MYBP10242 640 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 CKBP12277 381 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 CASP5P51878 434 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 CDC42EP1Q00587 391 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 FAAP100Q0VG06 881 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 PSMD2Q13200 908 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 MORC3Q14149 939 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 ZSCAN23Q3MJ62 389 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 ZNF618Q5T7W0 954 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 NT5DC1Q5TFE4 455 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 ZNF658Q5TYW1 1059 aaPredicted RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 SASS6Q6UVJ0 657 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 RBM43Q6ZSC3 357 aaKnown RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 ZNF720Q7Z2F6 126 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 ZBTB8OSQ8IWT0 167 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 GLIS3Q8NEA6 775 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 TOX2Q96NM4 488 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 FIZ1Q96SL8 496 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 NTPCRQ9BSD7 190 aaKnown RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 TRAIPQ9BWF2 469 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 CELF4Q9BZC1 486 aaKnown RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 INO80BQ9C086 356 aaPredicted RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 NIF3L1Q9GZT8 377 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 ADAMTS10Q9H324 1103 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 IFT122Q9HBG6 1241 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
SMG1-214ENST00000568038 OLFML3Q9NRN5 406 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 TMEM39AQ9NV64 488 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 KCNG1Q9UIX4 513 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 MAPK8IP1Q9UQF2 711 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 TRPV2Q9Y5S1 764 aa8.49□□□□□ -1.05
SMG1-214ENST00000568038 DENND3A2RUS2 1198 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 PRR19A6NJB7 356 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 K7ERI5 159 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 CPNE3O75131 537 aaKnown RBP8.48□□□□□ -1.05
SMG1-214ENST00000568038 RPLP2P05387 115 aaKnown RBP8.48□□□□□ -1.05
SMG1-214ENST00000568038 CLTBP09497 229 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 BMP6P22004 513 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 FGFR4P22455 802 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 MAOBP27338 520 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 CRYBB1P53674 252 aaPredicted RBP8.48□□□□□ -1.05
SMG1-214ENST00000568038 NCKAP1LP55160 1127 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 PTENP60484 403 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 BFSP2Q13515 415 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 L1TD1Q5T7N2 865 aaKnown RBP8.48□□□□□ -1.05
SMG1-214ENST00000568038 STXBP4Q6ZWJ1 553 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 SRGAP1Q7Z6B7 1085 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 RPAINQ86UA6 219 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 ZNF410Q86VK4 478 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 NELFCDQ8IXH7 590 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 TRIML1Q8N9V2 468 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 KIAA0895Q8NCT3 520 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 TMEM161BQ8NDZ6 487 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 CAGE1Q8TC20 777 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 TMEM40Q8WWA1 233 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
SMG1-214ENST00000568038 GCOM2Q9BZD3 368 aaPredicted RBP8.48□□□□□ -1.05
SMG1-214ENST00000568038 C2orf40Q9H1Z8 148 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 HIPK3Q9H422 1215 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 MINDY3Q9H8M7 445 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 NPHS2Q9NP85 383 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 ARHGAP28Q9P2N2 729 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 UMODL1Q5DID0 1318 aa8.48□□□□□ -1.05
SMG1-214ENST00000568038 FAM95CA0A1B0GW59 222 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 H0YCG3 227 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 CAND2O75155 1236 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 TIAF1O95411 115 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 PRKCBP05771 671 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 GHRP10912 638 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 DARSP14868 501 aaKnown RBP8.47□□□□□ -1.05
SMG1-214ENST00000568038 CYP2C18P33260 490 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 PRCPP42785 496 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 EFNA5P52803 228 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms