RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ZNF280DQ6N043 979 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 RSPO2Q6UXX9 243 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 GET4Q7L5D6 327 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 DYMQ7RTS9 669 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ZNF720Q7Z2F6 126 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 GRASPQ7Z6J2 395 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 SFR1Q86XK3 245 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 LINC00301Q8NCQ3 95 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 APPL2Q8NEU8 664 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 BEST2Q8NFU1 509 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ZNF461Q8TAF7 563 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 POMGNT1Q8WZA1 660 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 DNAJC19Q96DA6 116 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ZNF396Q96N95 335 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 MYADMQ96S97 322 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 STRA6Q9BX79 667 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 IRX2Q9BZI1 471 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 TNMDQ9H2S6 317 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 SMOC2Q9H3U7 446 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 CUEDC2Q9H467 287 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 MRPL44Q9H9J2 332 aaKnown RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 OLFML3Q9NRN5 406 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 CPSF3Q9UKF6 684 aaKnown RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 AGO2Q9UKV8 859 aaKnown RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 MAFFQ9ULX9 164 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 EXOC7Q9UPT5 735 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 DERAQ9Y315 318 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 C2CD2Q9Y426 696 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 PCDHGA4Q9Y5G9 962 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 STYXL1Q9Y6J8 313 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 DENND4CQ5VZ89 1909 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 NUP210Q8TEM1 1887 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 A0A087X0B3 334 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ANKRD63C9JTQ0 380 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ANHXE9PGG2 379 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 PRRG1O14668 218 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CCL16O15467 120 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CUTAO60888 179 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 OAZ2O95190 189 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 IL18RAPO95256 599 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 GCNT3O95395 438 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 F13A1P00488 732 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 PDGFBP01127 241 aaPredicted RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 LRG1P02750 347 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 NFICP08651 508 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ZSCAN22P10073 491 aaPredicted RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 SRFP11831 508 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ODC1P11926 461 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 IDEP14735 1019 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 TYMPP19971 482 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 GARTP22102 1010 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 AVPR2P30518 371 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ADSSP30520 456 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 AARSP49588 968 aaKnown RBP eCLIP5.19□□□□□ -1.58
CLK3-219ENST00000567805 ACOT2P49753 483 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CLCN5P51795 746 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 PTPN5P54829 565 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 VCPP55072 806 aaKnown RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 LILRA4P59901 499 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 NTHL1P78549 312 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 AMPD3Q01432 767 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 NHLH1Q02575 133 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 YWHAHQ04917 246 aaPredicted RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 HTR4Q13639 388 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 TMEM132DQ14C87 1099 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CTXN3Q4LDR2 81 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 PABPC1LQ4VXU2 614 aaKnown RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 DMRTA1Q5VZB9 504 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ATL3Q6DD88 541 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 JADE1Q6IE81 842 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 MTSS1LQ765P7 747 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 USP37Q86T82 979 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 NT5DC4Q86YG4 428 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CCDC65Q8IXS2 484 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 TCEAL8Q8IYN2 117 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 PDILTQ8N807 584 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 KCNG4Q8TDN1 519 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 FGF13Q92913 245 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 KCTD12Q96CX2 325 aaKnown RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 ACCSQ96QU6 501 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 PANK2Q9BZ23 570 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 LRRC27Q9C0I9 530 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 IRF2BPLQ9H1B7 796 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 MFSD1Q9H3U5 465 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 ASB7Q9H672 318 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 MAGEF1Q9HAY2 307 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CYP4F11Q9HBI6 524 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 AVENQ9NQS1 362 aaPredicted RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 PANK4Q9NVE7 773 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 KBTBD4Q9NVX7 518 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 TFIP11Q9UBB9 837 aaKnown RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 WNT16Q9UBV4 365 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 AFF4Q9UHB7 1163 aaKnown RBP5.19□□□□□ -1.58
CLK3-219ENST00000567805 FBXL5Q9UKA1 691 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 FBXL21Q9UKT6 434 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 CDH7Q9ULB5 785 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 KCNH3Q9ULD8 1083 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 POLIQ9UNA4 740 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 NUMBLQ9Y6R0 609 aa5.19□□□□□ -1.58
CLK3-219ENST00000567805 OBSL1O75147 1896 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms