RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 NWD1Q149M9 1564 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 AHRRA9YTQ3 701 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 SPATA31D3P0C874 917 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 NEK2P51955 445 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 CDC42EP1Q00587 391 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 CREMQ03060 361 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 IL10RAQ13651 578 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 C3orf36Q3SXR2 165 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 SPATA31D4Q6ZUB0 917 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 SEM1Q6ZVN7 128 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 MED25Q71SY5 747 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 SLC16A11Q8NCK7 471 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 MYOCQ99972 504 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 REXO4Q9GZR2 422 aaKnown RBP10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 ZNF768Q9H5H4 540 aaKnown RBP10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
NIFKP4-201ENST00000567275 CFAP65Q6ZU64 1925 aaKnown RBP10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 PPFIA4O75335 1185 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 RPLP2P05387 115 aaKnown RBP10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 ADH4P08319 380 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 ATP8B2P98198 1209 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 CLIP3Q96DZ5 547 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 AASDHPPTQ9NRN7 309 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 GPRC5BQ9NZH0 403 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 SLC23A1Q9UHI7 598 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 SERPINB13Q9UIV8 391 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 LUC7L2Q9Y383 392 aaKnown RBP10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 CHST2Q9Y4C5 530 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 PLEKHG1Q9ULL1 1385 aa10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 XIRP1Q702N8 1843 aaKnown RBP10.61□□□□□ -0.71
NIFKP4-201ENST00000567275 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 RNASET2O00584 256 aaKnown RBP10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 SGTAO43765 313 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 PDGFRBP09619 1106 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 ZSCAN20P17040 1043 aaPredicted RBP10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 EDNRBP24530 442 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 ACVRL1P37023 503 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 UBXN2BQ14CS0 331 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 UBE3BQ7Z3V4 1068 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 PLXDC1Q8IUK5 500 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 USP15Q9Y4E8 981 aaPredicted RBP10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 MSH6P52701 1360 aa10.6□□□□□ -0.71
NIFKP4-201ENST00000567275 ZFYVE9O95405 1425 aa10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 ALAS1P13196 640 aa10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 CTXN1P60606 82 aa10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 TARDBPQ13148 414 aaKnown RBP eCLIP10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 FAM102AQ5T9C2 384 aaPredicted RBP10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 KAT5Q92993 513 aa10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 RGS17Q9UGC6 210 aaPredicted RBP10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 ATP11BQ9Y2G3 1177 aa10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 PIK3R4Q99570 1358 aa10.59□□□□□ -0.71
NIFKP4-201ENST00000567275 CYR61O00622 381 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 KIAA0391O15091 583 aaKnown RBP10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 ZNF185O15231 689 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 ZRANB2O95218 330 aaKnown RBP eCLIP10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 ITGB1P05556 798 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 LAG3P18627 525 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 NR4A1P22736 598 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 TIGD2Q4W5G0 525 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 PDCD4Q53EL6 469 aaKnown RBP10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 TMEM240Q5SV17 173 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 CMTR2Q8IYT2 770 aaKnown RBP10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 C11orf54Q9H0W9 315 aaPredicted RBP10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 AKIP1Q9NQ31 210 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 FAM30AQ9NZY2 134 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 FZD1Q9UP38 647 aa10.58□□□□□ -0.72
NIFKP4-201ENST00000567275 ROCK1Q13464 1354 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 GAGE12BA1L429 117 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 ALDH1L1O75891 902 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 NCR1O76036 304 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 IL33O95760 270 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 FAM189BP81408 668 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 TSHZ3Q63HK5 1081 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 ZFPM1Q8IX07 1006 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 CPA6Q8N4T0 437 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 STAG1Q8WVM7 1258 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 LENG9Q96B70 501 aa10.57□□□□□ -0.72
NIFKP4-201ENST00000567275 TCRBV7S2A1N4TA0A589 114 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 AKAP8O43823 692 aaKnown RBP10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 RAB39AQ14964 217 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 AGAP9Q5VTM2 703 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 METRNLQ641Q3 311 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 RHOT2Q8IXI1 618 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 NEU4Q8WWR8 484 aaPredicted RBP10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 CLPTM1LQ96KA5 538 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 NEU1Q99519 415 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 TEX101Q9BY14 249 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 FBXO34Q9NWN3 711 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 CFAP20Q9Y6A4 193 aaKnown RBP10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 RIMS2Q9UQ26 1411 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
NIFKP4-201ENST00000567275 JCADQ9P266 1359 aa10.55□□□□□ -0.72
NIFKP4-201ENST00000567275 ROBO1Q9Y6N7 1651 aa10.55□□□□□ -0.72
NIFKP4-201ENST00000567275 KCNV1Q6PIU1 500 aa10.55□□□□□ -0.72
NIFKP4-201ENST00000567275 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
NIFKP4-201ENST00000567275 MRGPREQ86SM8 312 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms