RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 LILRA4P59901 499 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 PSMD5Q16401 504 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 ZNF280DQ6N043 979 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 ELMSAN1Q6PJG2 1045 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 CEP57Q86XR8 500 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 MRPL43Q8N983 215 aaKnown RBP13.11□□□□□ -0.31
SF3B3-208ENST00000567250 CCDC150Q8NCX0 1101 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-208ENST00000567250 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-208ENST00000567250 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
SF3B3-208ENST00000567250 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
SF3B3-208ENST00000567250 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 C2orf71A6NGG8 1288 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 KPNA7A9QM74 516 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 H7C4K7 107 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 C2CD2LO14523 706 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 PPEF2O14830 753 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 CXCL14O95715 111 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TYMPP19971 482 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TKTP29401 623 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 ATICP31939 592 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 PIK3CAP42336 1068 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 NDUFV1P49821 464 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 MXI1P50539 228 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 DLG4P78352 724 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 YWHAHQ04917 246 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TYRO3Q06418 890 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 CETN1Q12798 172 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 ZACNQ401N2 412 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TDRD10Q5VZ19 366 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 KRT39Q6A163 491 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 METTL23Q86XA0 190 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 PLEKHO2Q8TD55 490 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 EEF2KMTQ96G04 330 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 OXCT2Q9BYC2 517 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 GZF1Q9H116 711 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 THAP9Q9H5L6 903 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 TLE6Q9H808 572 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 MAGEC2Q9UBF1 373 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-208ENST00000567250 REV3LO60673 3130 aa13.1□□□□□ -0.31
SF3B3-208ENST00000567250 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
SF3B3-208ENST00000567250 I3L4J1 428 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 HUS1O60921 280 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 STAU1O95793 577 aaKnown RBP13.09□□□□□ -0.31
SF3B3-208ENST00000567250 P4HA1P13674 534 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 GCLMP48507 274 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 MCCD1P59942 119 aaPredicted RBP13.09□□□□□ -0.31
SF3B3-208ENST00000567250 TNNC1P63316 161 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 NCOA4Q13772 614 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 ZNF699Q32M78 642 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 TCEAL5Q5H9L2 206 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
SF3B3-208ENST00000567250 KIAA0319Q5VV43 1072 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 CD300LGQ6UXG3 332 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 TAF4BQ92750 862 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 SENP8Q96LD8 212 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 MMRN2Q9H8L6 949 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 GDAP2Q9NXN4 497 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 FNIP2Q9P278 1114 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 MTRRQ9UBK8 725 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 DPP7Q9UHL4 492 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 SIX4Q9UIU6 781 aa13.09□□□□□ -0.31
SF3B3-208ENST00000567250 SYCE3A1L190 88 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 C1RP00736 705 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 C4BPAP04003 597 aaKnown RBP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 CYP11A1P05108 521 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 NRIP1P48552 1158 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 MYL5Q02045 173 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 SKIV2LQ15477 1246 aaKnown RBP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 DUSP6Q16828 381 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 ZNF667Q5HYK9 610 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 OVOS1Q6IE37 1185 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 PRSS55Q6UWB4 352 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-208ENST00000567250 C15orf39Q6ZRI6 1047 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 SV2AQ7L0J3 742 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 DPH6Q7L8W6 267 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 TMEM86AQ8N2M4 240 aa13.08□□□□□ -0.32
SF3B3-208ENST00000567250 TOP6BLQ8N6T0 577 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms