RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 TBX21Q9UL17 535 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 CNTN6Q9UQ52 1028 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 HES2Q9Y543 173 aa13.43□□□□□ -0.26
CFDP1-207ENST00000566901 EPN1Q9Y6I3 576 aaPredicted RBP13.43□□□□□ -0.26
CFDP1-207ENST00000566901 PRUNE2Q8WUY3 3088 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 SMIM28A0A1B0GU29 152 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 TRIM43BA6NCK2 446 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 MGEA5O60502 916 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 LRRN2O75325 713 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 IPO7O95373 1038 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 EOMESO95936 686 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ITGB3P05106 788 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 CCDC175P0C221 793 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 P4HA1P13674 534 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 RFC2P35250 354 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 MYL6P60660 151 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 KRT83P78385 493 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 FAM189BP81408 668 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 TDRD12Q587J7 1177 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 PLEKHG4Q58EX7 1191 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF662Q6ZS27 426 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF598Q86UK7 904 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 VPS36Q86VN1 386 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 CCAR2Q8N163 923 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 TXLNBQ8N3L3 684 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 UBR7Q8N806 425 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 TATDN2Q93075 761 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 TRIM43Q96BQ3 446 aaPredicted RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 FAM84AQ96KN4 292 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 PPP1R10Q96QC0 940 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ADAM2Q99965 735 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 SYT11Q9BT88 431 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 PI4K2AQ9BTU6 479 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 OSBPL7Q9BZF2 842 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 HIPK3Q9H422 1215 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 PARP2Q9UGN5 583 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
CFDP1-207ENST00000566901 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ADGRG1Q9Y653 693 aa13.42□□□□□ -0.26
CFDP1-207ENST00000566901 ANO9A1A5B4 782 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 C9IYK1 514 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 ATF7P17544 494 aaPredicted RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 PAX3P23760 479 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 AKAP5P24588 427 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 LRPAP1P30533 357 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 POLR2BP30876 1174 aaKnown RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 EIF4A3P38919 411 aaKnown RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 PNPLA4P41247 253 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 KIF11P52732 1056 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 BPIFB4P59827 614 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 SMAD3P84022 425 aaKnown RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 FPGSQ05932 587 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 BMS1Q14692 1282 aaKnown RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 MTF1Q14872 753 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 ARHGAP44Q17R89 818 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF667Q5HYK9 610 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 AGMOQ6ZNB7 445 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 TOGARAM2Q6ZUX3 1019 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 SLC24A5Q71RS6 500 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 ECHDC2Q86YB7 292 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 SEPT8Q92599 483 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 KAT5Q92993 513 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF560Q96MR9 790 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 RPS6KC1Q96S38 1066 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 APOL6Q9BWW8 343 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 BCO2Q9BYV7 579 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 DEF6Q9H4E7 631 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 LUC7LQ9NQ29 371 aaKnown RBP13.41□□□□□ -0.26
CFDP1-207ENST00000566901 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 EYSQ5T1H1 3165 aa13.41□□□□□ -0.26
CFDP1-207ENST00000566901 PTGESO14684 152 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 NBNO60934 754 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 ACO1P21399 889 aaKnown RBP13.4□□□□□ -0.26
CFDP1-207ENST00000566901 ASPAP45381 313 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF132P52740 706 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 PTK2Q05397 1052 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 GPNMBQ14956 572 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 SLC18A3Q16572 532 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 SPOPLQ6IQ16 392 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 ZNF677Q86XU0 584 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 LINC01599Q8WXQ3 324 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 HPDLQ96IR7 371 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 HAUS4Q9H6D7 363 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 RSAD1Q9HA92 442 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 NENFQ9UMX5 172 aa13.4□□□□□ -0.26
CFDP1-207ENST00000566901 NCOR1O75376 2440 aa13.39□□□□□ -0.27
CFDP1-207ENST00000566901 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
CFDP1-207ENST00000566901 PIRO00625 290 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms