RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TPGS2Q68CL5 300 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ZDHHC14Q8IZN3 488 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ZNF461Q8TAF7 563 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ZNF560Q96MR9 790 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 PCIF1Q9H4Z3 704 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 WDR6Q9NNW5 1121 aaKnown RBP21.49■■□□□ 1.03
CMTM3-211ENST00000565922 CLUHO75153 1309 aa21.49■■□□□ 1.03
CMTM3-211ENST00000565922 ANO9A1A5B4 782 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 ZNF233A6NK53 670 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 C2CD4DB7Z1M9 353 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 PIRO00625 290 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 TBC1D4O60343 1298 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 POU2F2P09086 479 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 TYMPP19971 482 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 ELF1P32519 619 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 TAF6P49848 677 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 LILRA4P59901 499 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 TMEM31Q5JXX7 168 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 EFCAB13Q8IY85 973 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 GRAMD1CQ8IYS0 662 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 GOLGA5Q8TBA6 731 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 SLC7A14Q8TBB6 771 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 SCFD1Q8WVM8 642 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 ZNF707Q96C28 371 aaPredicted RBP21.48■■□□□ 1.03
CMTM3-211ENST00000565922 SLC39A2Q9NP94 309 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 HSPBP1Q9NZL4 362 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 FBXL5Q9UKA1 691 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 DSEQ9UL01 958 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 MAFFQ9ULX9 164 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 DOCK8Q8NF50 2099 aa21.48■■□□□ 1.03
CMTM3-211ENST00000565922 GOLGA8IPA6NC78 632 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 GOLGA8JA6NMD2 632 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 GPR37L1O60883 481 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 PNPLA4P41247 253 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 TFAMQ00059 246 aaKnown RBP21.47■■□□□ 1.03
CMTM3-211ENST00000565922 SV2CQ496J9 727 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 RSPO2Q6UXX9 243 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-211ENST00000565922 GDPD2Q9HCC8 539 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 AGPAT3Q9NRZ7 376 aa21.47■■□□□ 1.03
CMTM3-211ENST00000565922 DOCK6Q96HP0 2047 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 WDR27A2RRH5 827 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 TULP1O00294 542 aaPredicted RBP21.46■■□□□ 1.03
CMTM3-211ENST00000565922 KLRC4O43908 158 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 ABLIM3O94929 683 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 OAZ2O95190 189 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 KIF20AO95235 890 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 TMEM191BP0C7N4 346 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 CPB1P15086 417 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 ATF2P15336 505 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 HOXD13P35453 343 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 KNOP1Q1ED39 458 aaKnown RBP21.46■■□□□ 1.03
CMTM3-211ENST00000565922 KRBA2Q6ZNG9 492 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 NELFCDQ8IXH7 590 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 SENP8Q96LD8 212 aa21.46■■□□□ 1.03
CMTM3-211ENST00000565922 R3HCC1Q9Y3T6 440 aaKnown RBP21.46■■□□□ 1.03
CMTM3-211ENST00000565922 OR6C75A6NL08 312 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 PRRG1O14668 218 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 PPEF2O14830 753 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 TGFB1I1O43294 461 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 ARPP19P56211 112 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 PTPN21Q16825 1174 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 KMT5BQ4FZB7 885 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 OVOS1Q6IE37 1185 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 C12orf56Q8IXR9 622 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 ZSWIM2Q8NEG5 633 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 ANKRD36BP1Q96IX9 119 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 ITGA11Q9UKX5 1188 aa21.45■■□□□ 1.02
CMTM3-211ENST00000565922 ZNF202O95125 648 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 LRG1P02750 347 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 RPN1P04843 607 aaKnown RBP21.44■■□□□ 1.02
CMTM3-211ENST00000565922 SNRNP35Q16560 246 aaKnown RBP21.44■■□□□ 1.02
CMTM3-211ENST00000565922 METTL23Q86XA0 190 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 TMEM130Q8N3G9 435 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 XXYLT1Q8NBI6 393 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 EDAQ92838 391 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 PDE11AQ9HCR9 933 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.44■■□□□ 1.021e-6■■■■□ 20.6
CMTM3-211ENST00000565922 AFF4Q9UHB7 1163 aaKnown RBP21.44■■□□□ 1.02
CMTM3-211ENST00000565922 CIZ1Q9ULV3 898 aaPredicted RBP21.44■■□□□ 1.02
CMTM3-211ENST00000565922 POLIQ9UNA4 740 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 SORCS3Q9UPU3 1222 aa21.44■■□□□ 1.02
CMTM3-211ENST00000565922 TIMM13Q9Y5L4 95 aaPredicted RBP21.44■■□□□ 1.02
CMTM3-211ENST00000565922 PRR33A8MZF0 331 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 CCL16O15467 120 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 PRPF40AO75400 957 aaKnown RBP21.43■■□□□ 1.02
CMTM3-211ENST00000565922 ITGB3P05106 788 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 CYP11A1P05108 521 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 GBP2P32456 591 aaPredicted RBP21.43■■□□□ 1.02
CMTM3-211ENST00000565922 MTMR3Q13615 1198 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 MYBPC2Q14324 1141 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 CBWD2Q8IUF1 395 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 WDR49Q8IV35 697 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 TCEAL8Q8IYN2 117 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 LRRC52Q8N7C0 313 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 KIAA0895Q8NCT3 520 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 GOLPH3LQ9H4A5 285 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 CYP4F11Q9HBI6 524 aa21.43■■□□□ 1.02
CMTM3-211ENST00000565922 ZFP37Q9Y6Q3 630 aaPredicted RBP21.43■■□□□ 1.02
CMTM3-211ENST00000565922 KPNA7A9QM74 516 aa21.42■■□□□ 1.02
CMTM3-211ENST00000565922 CYB561D2O14569 222 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms