RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SHCBP1Q8NEM2 672 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 SVIPQ8NHG7 77 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 NPLOC4Q8TAT6 608 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 MDM1Q8TC05 714 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 ACTRT1Q8TDG2 376 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 EPS8L3Q8TE67 593 aaKnown RBP6.62□□□□□ -1.35
PTPN9-204ENST00000564970 UBLCP1Q8WVY7 318 aaPredicted RBP6.62□□□□□ -1.35
PTPN9-204ENST00000564970 CNDP2Q96KP4 475 aaKnown RBP6.62□□□□□ -1.35
PTPN9-204ENST00000564970 CEP170P1Q96L14 293 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 SNX18Q96RF0 628 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 RMDN3Q96TC7 470 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 KRT12Q99456 494 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 COQ7Q99807 217 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 SELENOSQ9BQE4 189 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 TMEM168Q9H0V1 697 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 KCNN2Q9H2S1 579 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 SNX25Q9H3E2 840 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 CUEDC2Q9H467 287 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 ZHX3Q9H4I2 956 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 PPCSQ9HAB8 311 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 SYTL2Q9HCH5 934 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 FARSBQ9NSD9 589 aaKnown RBP6.62□□□□□ -1.35
PTPN9-204ENST00000564970 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 HACD3Q9P035 362 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 ANKMY1Q9P2S6 941 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 IP6K2Q9UHH9 426 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 REXO2Q9Y3B8 237 aaKnown RBP6.62□□□□□ -1.35
PTPN9-204ENST00000564970 AP4S1Q9Y587 144 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 PCDHA5Q9Y5H7 936 aa6.62□□□□□ -1.35
PTPN9-204ENST00000564970 RBM8AQ9Y5S9 174 aaKnown RBP6.62□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF142P52746 1687 aaPredicted RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ADGRB1O14514 1584 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 BCL9LQ86UU0 1499 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 OR5K3A6NET4 321 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 CCDC160A6NGH7 325 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 BTNL10A8MVZ5 291 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 F8W810 466 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 H7C1D1 291 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 TK2O00142 265 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 VWA5AO00534 786 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 SH2B2O14492 632 aaPredicted RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 IRS4O14654 1257 aaPredicted RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ENC1O14682 589 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 GNPATO15228 680 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 PDPK1O15530 556 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 SRGAP2O75044 1071 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 TBX10O75333 385 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 SPAG7O75391 227 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 TCEA3O75764 348 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 RHOBTB3O94955 611 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 OR5F1O95221 314 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 DDX58O95786 925 aaKnown RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ASS1P00966 412 aaKnown RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ITGB1P05556 798 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 KRT7P08729 469 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 FAM153BP0C7A2 387 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 KRT3P12035 628 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ETS2P15036 469 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF23P17027 643 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 GM2AP17900 193 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 PLCG1P19174 1290 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 STX2P32856 288 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 HSD17B2P37059 387 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 RXRGP48443 463 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 CENPAP49450 140 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 DNM2P50570 870 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 FXR1P51114 621 aaKnown RBP eCLIP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 CCR3P51677 355 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 STX17P56962 302 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ESRRGP62508 458 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 MDM2Q00987 491 aaPredicted RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 POU5F1BQ06416 359 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 CDC16Q13042 620 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 FLIIQ13045 1269 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 STK3Q13188 491 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 APOFQ13790 326 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 C16orf72Q14CZ0 275 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 PDK3Q15120 406 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 TTF1Q15361 905 aaPredicted RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 UAP1Q16222 522 aaPredicted RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 LETM2Q2VYF4 491 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 TRIM16LQ309B1 348 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 FAM153CQ494X1 144 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 C12orf60Q5U649 245 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 SYCE2Q6PIF2 218 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 KYAT3Q6YP21 454 aaKnown RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF600Q6ZNG1 722 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 C15orf52Q6ZUT6 534 aaKnown RBP6.61□□□□□ -1.35
PTPN9-204ENST00000564970 PODNQ7Z5L7 613 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 SATL1Q86VE3 508 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 OSTM1Q86WC4 334 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 RASSF3Q86WH2 238 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 CCDC25Q86WR0 208 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF677Q86XU0 584 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF354CQ86Y25 554 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 CLYBLQ8N0X4 340 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 SUPT20HQ8NEM7 779 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 APPL2Q8NEU8 664 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 PI4K2BQ8TCG2 481 aa6.61□□□□□ -1.35
PTPN9-204ENST00000564970 ADAMTS16Q8TE57 1224 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms