RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 C1orf127Q8N9H9 656 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ZNF397Q8NF99 534 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 BEST2Q8NFU1 509 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ZMAT2Q96NC0 199 aaKnown RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 NT5C1BQ96P26 610 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 RPS6KC1Q96S38 1066 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 IMPG2Q9BZV3 1241 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 CXCL16Q9H2A7 254 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 RSAD1Q9HA92 442 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 UBN1Q9NPG3 1134 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 NLRC4Q9NPP4 1024 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 APEX2Q9UBZ4 518 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
SF3B3-205ENST00000564899 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 FHOD1Q9Y613 1164 aa11.93□□□□□ -0.5
SF3B3-205ENST00000564899 ATG2AQ2TAZ0 1938 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 SMIM28A0A1B0GU29 152 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 H3BQ06 376 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-205ENST00000564899 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-205ENST00000564899 XPOTO43592 962 aaKnown RBP11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ZC3H11AO75152 810 aaKnown RBP eCLIP11.92□□□□□ -0.5
SF3B3-205ENST00000564899 EOMESO95936 686 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ITGB3P05106 788 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 KRT19P08727 400 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 RFX1P22670 979 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 KRT9P35527 623 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 GUCY2FP51841 1108 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ZBED6P86452 979 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 RAPGEF1Q13905 1077 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 IQCEQ6IPM2 695 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 CNKSR3Q6P9H4 555 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ARHGEF19Q8IW93 802 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 TC2NQ8N9U0 490 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 GAD1Q99259 594 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 C17orf80Q9BSJ5 609 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 PI4K2AQ9BTU6 479 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 RNF19AQ9NV58 838 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 DPP3Q9NY33 737 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 TUBGCP4Q9UGJ1 667 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 SIX4Q9UIU6 781 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 FBXL5Q9UKA1 691 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 DNAJC12Q9UKB3 198 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ITGA11Q9UKX5 1188 aa11.92□□□□□ -0.5
SF3B3-205ENST00000564899 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
SF3B3-205ENST00000564899 ARL5CA6NH57 179 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 ENPP3O14638 875 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 PTGESO14684 152 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 ASS1P00966 412 aaKnown RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 CST3P01034 146 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 POLR2BP30876 1174 aaKnown RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 SCNN1GP51170 649 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 MYL6P60660 151 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 FAM189BP81408 668 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 RBP5P82980 135 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 ZBTB6Q15916 424 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 LEXMQ3ZCV2 418 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 SPOPLQ6IQ16 392 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 PHLDB3Q6NSJ2 640 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 TMEM130Q8N3G9 435 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 PPM1KQ8N3J5 372 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 OR8K1Q8NGG5 319 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 BAP1Q92560 729 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 C18orf25Q96B23 403 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 ELMO3Q96BJ8 720 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 SPAG5Q96R06 1193 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 NAA15Q9BXJ9 866 aaKnown RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 TMEM161AQ9NX61 479 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-205ENST00000564899 INPP5FQ9Y2H2 1132 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 RALGAPA2Q2PPJ7 1873 aa11.91□□□□□ -0.5
SF3B3-205ENST00000564899 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 TECTAO75443 2155 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 BAIAP3O94812 1187 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 GJB5O95377 273 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 CYP3A5P20815 502 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 KCNJ6P48051 423 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 ERVK-21P61565 698 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 IKBKEQ14164 716 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 ARHGAP44Q17R89 818 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 PTCRAQ6ISU1 281 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-205ENST00000564899 GLB1LQ6UWU2 654 aa11.9□□□□□ -0.5
SF3B3-205ENST00000564899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms