RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 UCHL3P15374 230 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 ALDH7A1P49419 539 aaKnown RBP20.17■□□□□ 0.82
SPNS1-206ENST00000564476 GATMP50440 423 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 SHHQ15465 462 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 WDR72Q3MJ13 1102 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 PHLDB3Q6NSJ2 640 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 DRC7Q8IY82 874 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 ZNF397Q8NF99 534 aaPredicted RBP20.17■□□□□ 0.82
SPNS1-206ENST00000564476 SP7Q8TDD2 431 aaPredicted RBP20.17■□□□□ 0.82
SPNS1-206ENST00000564476 NIF3L1Q9GZT8 377 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 NUCKS1Q9H1E3 243 aaKnown RBP20.17■□□□□ 0.82
SPNS1-206ENST00000564476 AAASQ9NRG9 546 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 CEP72Q9P209 647 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 MYO6Q9UM54 1294 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 NRP1O14786 923 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 NOL4O94818 638 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 LAG3P18627 525 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 OR1G1P47890 313 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPNS1-206ENST00000564476 YWHAEP62258 255 aaKnown RBP20.16■□□□□ 0.82
SPNS1-206ENST00000564476 TNNC1P63316 161 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 C9orf50Q5SZB4 431 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 FAM117BQ6P1L5 589 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 FIBCD1Q8N539 461 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 SPATA18Q8TC71 538 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 TATDN2Q93075 761 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 PI4K2AQ9BTU6 479 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 NAA15Q9BXJ9 866 aaKnown RBP20.16■□□□□ 0.82
SPNS1-206ENST00000564476 STK33Q9BYT3 514 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 GANQ9H2C0 597 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 CWH43Q9H720 699 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 UBE2TQ9NPD8 197 aaPredicted RBP20.16■□□□□ 0.82
SPNS1-206ENST00000564476 STK39Q9UEW8 545 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 DNAJC12Q9UKB3 198 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 CAPN11Q9UMQ6 739 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 NUB1Q9Y5A7 615 aa20.16■□□□□ 0.82
SPNS1-206ENST00000564476 TLL1O43897 1013 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 KLK7P49862 253 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 POLR2FP61218 127 aaKnown RBP20.15■□□□□ 0.82
SPNS1-206ENST00000564476 ELAVL2Q12926 359 aaKnown RBP20.15■□□□□ 0.82
SPNS1-206ENST00000564476 TBX2Q13207 712 aaPredicted RBP20.15■□□□□ 0.82
SPNS1-206ENST00000564476 CUL2Q13617 745 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 PTPN21Q16825 1174 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 PAN2Q504Q3 1202 aaKnown RBP20.15■□□□□ 0.82
SPNS1-206ENST00000564476 SCARA3Q6AZY7 606 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 CACNA2D4Q7Z3S7 1137 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 TMC6Q7Z403 805 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 PPM1KQ8N3J5 372 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 TTYH3Q9C0H2 523 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 APOBEC3GQ9HC16 384 aaKnown RBP20.15■□□□□ 0.82
SPNS1-206ENST00000564476 LUC7L2Q9Y383 392 aaKnown RBP20.15■□□□□ 0.82
SPNS1-206ENST00000564476 COL4A6Q14031 1691 aa20.15■□□□□ 0.82
SPNS1-206ENST00000564476 PPEF2O14830 753 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 LRRN2O75325 713 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 TADA2AO75478 443 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 BCAR1P56945 870 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 ZBED6P86452 979 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 LRMPQ12912 555 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 LRIT3Q3SXY7 679 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 LIMS2Q7Z4I7 341 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 TMCO2Q7Z6W1 182 aaPredicted RBP20.14■□□□□ 0.81
SPNS1-206ENST00000564476 TOP6BLQ8N6T0 577 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 CLP1Q92989 425 aaKnown RBP20.14■□□□□ 0.81
SPNS1-206ENST00000564476 ZNF558Q96NG5 402 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 PAAF1Q9BRP4 392 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 BCO2Q9BYV7 579 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 NXF1Q9UBU9 619 aaKnown RBP20.14■□□□□ 0.81
SPNS1-206ENST00000564476 DNAJB4Q9UDY4 337 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 DSEQ9UL01 958 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 SNX9Q9Y5X1 595 aa20.14■□□□□ 0.81
SPNS1-206ENST00000564476 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.13■□□□□ 0.81
SPNS1-206ENST00000564476 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.13■□□□□ 0.81
SPNS1-206ENST00000564476 HUS1O60921 280 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 TACC1O75410 805 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 CLSTN1O94985 981 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 PPM1AP35813 382 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 SLC11A1P49279 550 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 SPOUT1Q5T280 376 aaKnown RBP20.13■□□□□ 0.81
SPNS1-206ENST00000564476 IQCEQ6IPM2 695 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 SPOPLQ6IQ16 392 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 KCNT2Q6UVM3 1135 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 CD300LGQ6UXG3 332 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 DSTYKQ6XUX3 929 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 RRAGAQ7L523 313 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 CNGA4Q8IV77 575 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 ARHGEF19Q8IW93 802 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 TMEM86AQ8N2M4 240 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 DNAI2Q9GZS0 605 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 ADAM28Q9UKQ2 775 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 PCDHA11Q9Y5I1 949 aa20.13■□□□□ 0.81
SPNS1-206ENST00000564476 M0QZQ0 153 aa20.12■□□□□ 0.81
SPNS1-206ENST00000564476 CYB561D2O14569 222 aa20.12■□□□□ 0.81
SPNS1-206ENST00000564476 SPTLC1O15269 473 aa20.12■□□□□ 0.81
SPNS1-206ENST00000564476 B4GALT3O60512 393 aa20.12■□□□□ 0.81
SPNS1-206ENST00000564476 GYPCP04921 128 aa20.12■□□□□ 0.81
SPNS1-206ENST00000564476 CCDC172P0C7W6 258 aa20.12■□□□□ 0.81
SPNS1-206ENST00000564476 ASPAP45381 313 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms