RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 RIC8BQ9NVN3 520 aa4.41□□□□□ -1.7
ATP2A1-207ENST00000564470 PAG1Q9NWQ8 432 aa4.41□□□□□ -1.7
ATP2A1-207ENST00000564470 HMG20BQ9P0W2 317 aa4.41□□□□□ -1.7
ATP2A1-207ENST00000564470 ARHGAP28Q9P2N2 729 aa4.41□□□□□ -1.7
ATP2A1-207ENST00000564470 CCDC171Q6TFL3 1326 aa4.41□□□□□ -1.7
ATP2A1-207ENST00000564470 CEP290O15078 2479 aa4.4□□□□□ -1.7
ATP2A1-207ENST00000564470 MED23Q9ULK4 1368 aa4.4□□□□□ -1.7
ATP2A1-207ENST00000564470 DUOX1Q9NRD9 1551 aa4.4□□□□□ -1.7
ATP2A1-207ENST00000564470 A0A0D9SFI3 127 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 NPIPB8E9PQR5 432 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 UBE2Q2LH0YL09 131 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 OVOL3O00110 214 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 ECE2O60344 883 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 ZRANB2O95218 330 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 IFIT1P09914 478 aaKnown RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 UQCRFS1P1P0C7P4 283 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 ZKSCAN1P17029 563 aaPredicted RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 GPTP24298 496 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 HOXD10P28358 340 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 MAN1A1P33908 653 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 GNALP38405 381 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 RRADP55042 308 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 UBXN2AP68543 259 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 DBPQ10586 325 aaPredicted RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 KLF10Q13118 480 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 GRAPQ13588 217 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 UBE3CQ15386 1083 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 WDR72Q3MJ13 1102 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 LRIT3Q3SXY7 679 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 CCDC152Q4G0S7 254 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 AGBL4Q5VU57 503 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 YOD1Q5VVQ6 348 aaPredicted RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 ICE2Q659A1 982 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 CREB3L3Q68CJ9 461 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 RUFY3Q7L099 469 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 NLGN4XQ8N0W4 816 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 LRRC47Q8N1G4 583 aaKnown RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 GRAPLQ8TC17 118 aaPredicted RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 SH3RF2Q8TEC5 729 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 TNPO1Q92973 898 aaKnown RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 CDC5LQ99459 802 aaKnown RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 ARPC5LQ9BPX5 153 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 FSD1Q9BTV5 496 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 INO80BQ9C086 356 aaPredicted RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 PRO3102Q9H379 93 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 CATSPERZQ9NTU4 200 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 ING1Q9UK53 422 aaPredicted RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 LIMCH1Q9UPQ0 1083 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 TRAF6Q9Y4K3 522 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 RBM8AQ9Y5S9 174 aaKnown RBP4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 CYP46A1Q9Y6A2 500 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 SCINQ9Y6U3 715 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 FAM205AQ6ZU69 1335 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 MYO3BQ8WXR4 1341 aa4.4□□□□□ -1.71
ATP2A1-207ENST00000564470 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 TCRBV5S4A2TA0A5A2 114 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 YDJCA8MPS7 323 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 IFRD1O00458 451 aaPredicted RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 KLF4O43474 513 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CUTAO60888 179 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CAND2O75155 1236 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CR2P20023 1033 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 COMTP21964 271 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ADORA1P30542 326 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 EVCP57679 992 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 EXOSC10Q01780 885 aaKnown RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 POU5F1BQ06416 359 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 PAK1Q13153 545 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CRHR2Q13324 411 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ANKRD1Q15327 319 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 TTF1Q15361 905 aaPredicted RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 PUM3Q15397 648 aaKnown RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ALX1Q15699 326 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ATP2B3Q16720 1220 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 USP39Q53GS9 565 aaKnown RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 METTL24Q5JXM2 366 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ZSCAN25Q6NSZ9 544 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 PPP4R4Q6NUP7 873 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ARHGAP36Q6ZRI8 547 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 MTDHQ86UE4 582 aaKnown RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF589Q86UQ0 364 aaPredicted RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 OSTM1Q86WC4 334 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CREBRFQ8IUR6 639 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CKAP2LQ8IYA6 745 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 FUKQ8N0W3 1084 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 SAMD3Q8N6K7 520 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 C1orf131Q8NDD1 294 aaKnown RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 ST13P5Q8NFI4 369 aaPredicted RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 EXTL1Q92935 676 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 MKL1Q969V6 931 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 EDC3Q96F86 508 aaKnown RBP4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 AGXT2Q9BYV1 514 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 TMX1Q9H3N1 280 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 DBNDD1Q9H9R9 158 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 MYOZ2Q9NPC6 264 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CASS4Q9NQ75 786 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 PDRG1Q9NUG6 133 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 CTNNA3Q9UI47 895 aa4.39□□□□□ -1.71
ATP2A1-207ENST00000564470 PPP2R3BQ9Y5P8 575 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms