RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 GLYCTKQ8IVS8 523 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 FAXDC2Q96IV6 333 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 PPP1R12CQ9BZL4 782 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 RSAD1Q9HA92 442 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 ACP6Q9NPH0 428 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 CISHQ9NSE2 258 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 SLC38A7Q9NVC3 462 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 ARL5CA6NH57 179 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 STAU1O95793 577 aaKnown RBP23.5■■□□□ 1.35
LINC01960-201ENST00000563759 CYP11B1P15538 503 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 ATF7P17544 494 aaPredicted RBP23.5■■□□□ 1.35
LINC01960-201ENST00000563759 CYP3A5P20815 502 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 TNFAIP3P21580 790 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 MAGEA1P43355 309 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 C9orf57Q5W0N0 161 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 NYAP1Q6ZVC0 841 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 NOP9Q86U38 636 aaKnown RBP23.5■■□□□ 1.35
LINC01960-201ENST00000563759 TXLNBQ8N3L3 684 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 LRRC52Q8N7C0 313 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 RBBP8NLQ8NC74 664 aaPredicted RBP23.5■■□□□ 1.35
LINC01960-201ENST00000563759 PPP1R10Q96QC0 940 aaKnown RBP23.5■■□□□ 1.35
LINC01960-201ENST00000563759 AGPAT1Q99943 283 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 MICAL3Q7RTP6 2002 aa23.5■■□□□ 1.35
LINC01960-201ENST00000563759 WEE2P0C1S8 567 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 BPIFB4P59827 614 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 SOX4Q06945 474 aaPredicted RBP23.49■■□□□ 1.35
LINC01960-201ENST00000563759 TAF3Q5VWG9 929 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 SLC24A5Q71RS6 500 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 ECHDC2Q86YB7 292 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 LNX1Q8TBB1 728 aaPredicted RBP23.49■■□□□ 1.35
LINC01960-201ENST00000563759 ZNF560Q96MR9 790 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 SYT11Q9BT88 431 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 BCO2Q9BYV7 579 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 GOLGA2P5Q9HBQ8 144 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 UBN1Q9NPG3 1134 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 NAGPAQ9UK23 515 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 NOCTQ9UK39 431 aaKnown RBP23.49■■□□□ 1.35
LINC01960-201ENST00000563759 DDX3XO00571 662 aaKnown RBP eCLIP23.49■■□□□ 1.35
LINC01960-201ENST00000563759 PPEF2O14830 753 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 THP07101 528 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 RAP1GAPP47736 663 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 CCL23P55773 120 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 CCDC122Q5T0U0 273 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 RPUSD2Q8IZ73 545 aaKnown RBP23.49■■□□□ 1.35
LINC01960-201ENST00000563759 SEPT8Q92599 483 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 SCLYQ96I15 445 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 SMYD3Q9H7B4 428 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 TFR2Q9UP52 801 aa23.49■■□□□ 1.35
LINC01960-201ENST00000563759 KRT86O43790 486 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 SCNN1GP51170 649 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 KIF5AQ12840 1032 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 PLEKHG4Q58EX7 1191 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 ALKBH5Q6P6C2 394 aaKnown RBP23.48■■□□□ 1.35
LINC01960-201ENST00000563759 UBR7Q8N806 425 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 GSTCDQ8NEC7 633 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 LINC01599Q8WXQ3 324 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 MMS19Q96T76 1030 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 TSPYL2Q9H2G4 693 aaPredicted RBP23.48■■□□□ 1.35
LINC01960-201ENST00000563759 CNTN6Q9UQ52 1028 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 MYH10P35580 1976 aa23.48■■□□□ 1.35
LINC01960-201ENST00000563759 ANO9A1A5B4 782 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 C9IYK1 514 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 TNNT1P13805 278 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 C10orf76Q5T2E6 689 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 NECAB2Q7Z6G3 386 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 DBF4BQ8NFT6 615 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 TSGA10Q9BZW7 698 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 PARNO95453 639 aaKnown RBP23.47■■□□□ 1.35
LINC01960-201ENST00000563759 GNA15P30679 374 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 PNPLA4P41247 253 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 ARHGAP25P42331 645 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 AFF1P51825 1210 aaKnown RBP23.47■■□□□ 1.35
LINC01960-201ENST00000563759 GPNMBQ14956 572 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 ZNF598Q86UK7 904 aaKnown RBP23.47■■□□□ 1.35
LINC01960-201ENST00000563759 RTN4RL1Q86UN2 441 aaPredicted RBP23.47■■□□□ 1.35
LINC01960-201ENST00000563759 SLC30A5Q8TAD4 765 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 OLIG1Q8TAK6 271 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 APBB2Q92870 758 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 WNT8AQ9H1J5 351 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 TMEM39AQ9NV64 488 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 GUCA1BQ9UMX6 200 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 INPP5FQ9Y2H2 1132 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.47■■□□□ 1.35
LINC01960-201ENST00000563759 SNX9Q9Y5X1 595 aa23.47■■□□□ 1.35
LINC01960-201ENST00000563759 MKI67P46013 3256 aaKnown RBP23.46■■□□□ 1.35
LINC01960-201ENST00000563759 RCCD1A6NED2 376 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 KIF2AO00139 706 aaPredicted RBP23.46■■□□□ 1.35
LINC01960-201ENST00000563759 PIRO00625 290 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 MMEP08473 750 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 CLTBP09497 229 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 CYP2C18P33260 490 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 CDR2Q01850 454 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 NAB2Q15742 525 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 ZNF394Q53GI3 561 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 LACRTQ9GZZ8 138 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 CYP3A43Q9HB55 503 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 TRIM10Q9UDY6 481 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 TBX21Q9UL17 535 aa23.46■■□□□ 1.35
LINC01960-201ENST00000563759 KIF5CO60282 957 aa23.45■■□□□ 1.35
LINC01960-201ENST00000563759 EOMESO95936 686 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms