RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 NLRP7Q8WX94 980 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 KRT35Q92764 455 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 MCUR1Q96AQ8 359 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 PITPNM3Q9BZ71 974 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ADAM7Q9H2U9 754 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ANKEF1Q9NU02 776 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.06□□□□□ -0.64
RNF40-204ENST00000563683 HACL1Q9UJ83 578 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 DLEC1Q9Y238 1755 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 EME2A4GXA9 379 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 A6NHS1 94 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 P4HA2O15460 535 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 GGPS1O95749 300 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 INHBAP08476 426 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 CYP3A4P08684 503 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 RRM1P23921 792 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 PCK1P35558 622 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 IFI35P80217 286 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 POU5F1Q01860 360 aaKnown RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 HYIQ5T013 277 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 SPATA21Q7Z572 469 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 MFN1Q8IWA4 741 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 VPS52Q8N1B4 723 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 LRRC71Q8N4P6 559 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNF40-204ENST00000563683 RBBP8NLQ8NC74 664 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 SNF8Q96H20 258 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 ZDHHC18Q9NUE0 388 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 TXLNGQ9NUQ3 528 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 MYH3P11055 1940 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 FRMPD4Q14CM0 1322 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 MCF2LO15068 1137 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 SMIM24O75264 130 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 SPAG7O75391 227 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 KRT16P08779 473 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNF40-204ENST00000563683 COILP38432 576 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 DUOXA2Q1HG44 320 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 PPP6R3Q5H9R7 873 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 DPY19L2Q6NUT2 758 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 PARD3BQ8TEW8 1205 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 PRCCQ92733 491 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 RNF34Q969K3 372 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 TIPINQ9BVW5 301 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNF40-204ENST00000563683 LRP5O75197 1615 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 FDX1P10109 184 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 RALAP11233 206 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 ATP4AP20648 1035 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 ABCD1P33897 745 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 PSMC1P62191 440 aaKnown RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 CDR2Q01850 454 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 PDCD2Q16342 344 aaPredicted RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 LGSNQ5TDP6 509 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 CENPUQ71F23 418 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 ZBED8Q8IZ13 594 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 AGBL3Q8NEM8 1001 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 CCDC110Q8TBZ0 833 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 RBM41Q96IZ5 413 aaKnown RBP11.05□□□□□ -0.64
RNF40-204ENST00000563683 RILPQ96NA2 401 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 TSNARE1Q96NA8 513 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 FAM167BQ9BTA0 163 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 OSBPL8Q9BZF1 889 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 SEMA4AQ9H3S1 761 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
RNF40-204ENST00000563683 TCP11X1B4DZS4 312 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 OAS1P00973 400 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 ZBTB48P10074 688 aaPredicted RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 TBXAS1P24557 533 aaPredicted RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 CTCFP49711 727 aaPredicted RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 ARSEP51690 589 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 NOP14P78316 857 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 Q3C1V9 767 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 MAP7D3Q8IWC1 876 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PDIK1LQ8N165 341 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 KIF2BQ8N4N8 673 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 FAM49AQ9H0Q0 323 aaPredicted RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 HEY1Q9Y5J3 304 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PYGMP11217 842 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 PAPOLAP51003 745 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 ACAD10Q6JQN1 1059 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 ZNF449Q6P9G9 518 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 DPP9Q86TI2 863 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 EPS8L3Q8TE67 593 aaKnown RBP11.04□□□□□ -0.64
RNF40-204ENST00000563683 GRAMD1AQ96CP6 724 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 FGFR1OP2Q9NVK5 253 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 SEPT10Q9P0V9 454 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 FBXO40Q9UH90 709 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
RNF40-204ENST00000563683 ANKRD63C9JTQ0 380 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms