RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 ODC1P11926 461 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 PNPLA4P41247 253 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 ASIC1P78348 528 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 DSTYKQ6XUX3 929 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 UNC13DQ70J99 1090 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 GET4Q7L5D6 327 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 EPM2AIP1Q7L775 607 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 USP37Q86T82 979 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 FGFBP2Q9BYJ0 223 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 KIAA1586Q9HCI6 787 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 DPP3Q9NY33 737 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 HSFX1Q9UBD0 423 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 USP25Q9UHP3 1055 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 RAPGEFL1Q9UHV5 662 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 MYH11P35749 1972 aa13.23□□□□□ -0.29
NSMCE1-204ENST00000563273 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 PRRG1O14668 218 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 PPEF2O14830 753 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 LRG1P02750 347 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 CMA1P23946 247 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 TAF6P49848 677 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 GUCY2FP51841 1108 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 KRT85P78386 507 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 GPR17Q13304 367 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 HTR4Q13639 388 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 FOXD4L6Q3SYB3 417 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 PABPC1LQ4VXU2 614 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 FAM26FQ5R3K3 315 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 FOXD4L3Q6VB84 417 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 EFCAB13Q8IY85 973 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 LEMD2Q8NC56 503 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 SENP8Q96LD8 212 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 CBWD1Q9BRT8 395 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 FAM213AQ9BRX8 229 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 IKZF4Q9H2S9 585 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 RBAKQ9NYW8 714 aaPredicted RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 GDE1Q9NZC3 331 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 DNMT3BQ9UBC3 853 aaKnown RBP13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 INSL5Q9Y5Q6 135 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 CITO14578 2027 aa13.22□□□□□ -0.29
NSMCE1-204ENST00000563273 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SPTLC1O15269 473 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 MYL1P05976 194 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 RHOP08100 348 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SRFP11831 508 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 CPB1P15086 417 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 PTPN2P17706 415 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 EPHA5P54756 1037 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 ADCY1Q08828 1119 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SMARCB1Q12824 385 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SURF1Q15526 300 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 BMT2Q1RMZ1 405 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 OVOS1Q6IE37 1185 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 ARMCX5Q6P1M9 558 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 GPD1LQ8N335 351 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 LRRC52Q8N7C0 313 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 SPATA18Q8TC71 538 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 FGF13Q92913 245 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 ZNF560Q96MR9 790 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 CYP4F11Q9HBI6 524 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 WNT16Q9UBV4 365 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 ITGA11Q9UKX5 1188 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 ZDHHC9Q9Y397 364 aa13.21□□□□□ -0.29
NSMCE1-204ENST00000563273 ZNF197O14709 1029 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 SEC24AO95486 1093 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 HOXD13P35453 343 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 CLCN5P51795 746 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 ARPP19P56211 112 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 NTHL1P78549 312 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 PLD1Q13393 1074 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 SV2CQ496J9 727 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 ELMOD1Q8N336 334 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 C1orf127Q8N9H9 656 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 TMEM174Q8WUU8 243 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 SAAL1Q96ER3 474 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 SCAND2PQ9GZW5 306 aaPredicted RBP13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 SLC2A4RGQ9NR83 387 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
NSMCE1-204ENST00000563273 HPSEQ9Y251 543 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms