RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 NEUROG2Q9H2A3 272 aa20.39■□□□□ 0.85
SMPD3-203ENST00000563226 ADAM22Q9P0K1 906 aa20.39■□□□□ 0.85
SMPD3-203ENST00000563226 TCRBV7S2A1N4TA0A589 114 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 TMOD1P28289 359 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 HUNKP57058 714 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 IRX5P78411 483 aaPredicted RBP20.38■□□□□ 0.85
SMPD3-203ENST00000563226 HSP90B2PQ58FF3 399 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 DAB2IPQ5VWQ8 1189 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 C1orf127Q8N9H9 656 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 LENG1Q96BZ8 264 aaPredicted RBP20.38■□□□□ 0.85
SMPD3-203ENST00000563226 TRIM11Q96F44 468 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 NAP1L3Q99457 506 aaPredicted RBP20.38■□□□□ 0.85
SMPD3-203ENST00000563226 TRIM51Q9BSJ1 452 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 MED4Q9NPJ6 270 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 FLRT1Q9NZU1 646 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 CCDC66A2RUB6 948 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 GOLGA6BA6NDN3 693 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 IL18RAPO95256 599 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 GJB6O95452 261 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 KRT19P08727 400 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 MCF2P10911 925 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 FGFR4P22455 802 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 RAP1GAPP47736 663 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 NNTQ13423 1086 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 DGKDQ16760 1214 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 IQSEC1Q6DN90 963 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 JADE1Q6IE81 842 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 PHF13Q86YI8 300 aaPredicted RBP20.38■□□□□ 0.85
SMPD3-203ENST00000563226 KIAA0319LQ8IZA0 1049 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 SETD4Q9NVD3 440 aa20.38■□□□□ 0.85
SMPD3-203ENST00000563226 NXF1Q9UBU9 619 aaKnown RBP20.38■□□□□ 0.85
SMPD3-203ENST00000563226 DAPK3O43293 454 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 ZEB2O60315 1214 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 TSPAN1O60635 241 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 TNFAIP2Q03169 654 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 DMTNQ08495 405 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 SEL1L2Q5TEA6 688 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 PRELID2Q8N945 189 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 CCDC26Q8TAB7 109 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 SCLT1Q96NL6 688 aa20.37■□□□□ 0.85
SMPD3-203ENST00000563226 GOLGA6L10A0A0M3HER8 536 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 DYNC1LI2O43237 492 aaPredicted RBP20.36■□□□□ 0.85
SMPD3-203ENST00000563226 RNF40O75150 1001 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 HLTFQ14527 1009 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMPD3-203ENST00000563226 LLGL1Q15334 1064 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 MORN1Q5T089 497 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 MAATS1Q7Z4T9 603 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 TFAP2BQ92481 460 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 NMRK2Q9NPI5 230 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 CITO14578 2027 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 RWDD2BP57060 319 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 TMEM62Q0P6H9 643 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 MAMLD1Q13495 774 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 SLC10A6Q3KNW5 377 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 CXorf38Q8TB03 319 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 C18orf8Q96DM3 657 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 TRPM7Q96QT4 1865 aa20.36■□□□□ 0.85
SMPD3-203ENST00000563226 TRIP11Q15643 1979 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 ITGB3P05106 788 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 CUL1Q13616 776 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 LIN9Q5TKA1 542 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 SLC13A5Q86YT5 568 aaPredicted RBP20.35■□□□□ 0.85
SMPD3-203ENST00000563226 C1orf131Q8NDD1 294 aaKnown RBP20.35■□□□□ 0.85
SMPD3-203ENST00000563226 SDCBP2Q9H190 292 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 DPH5Q9H2P9 285 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 ADAM21Q9UKJ8 722 aa20.35■□□□□ 0.85
SMPD3-203ENST00000563226 MYO1FO00160 1098 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 O00370 1275 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 PHF2O75151 1096 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 ITGBL1O95965 494 aaPredicted RBP20.34■□□□□ 0.85
SMPD3-203ENST00000563226 CDH8P55286 799 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 DR1Q01658 176 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 MAP2K5Q13163 448 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 SIX1Q15475 284 aaPredicted RBP20.34■□□□□ 0.85
SMPD3-203ENST00000563226 CCL14Q16627 93 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 KIZQ2M2Z5 673 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 PLEKHA7Q6IQ23 1121 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 TTC27Q6P3X3 843 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 WHAMMQ8TF30 809 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 SEC14L1Q92503 715 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 TRIM31Q9BZY9 425 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
SMPD3-203ENST00000563226 MMP8P22894 467 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 C1QBPQ07021 282 aaKnown RBP20.34■□□□□ 0.85
SMPD3-203ENST00000563226 OLFML2BQ68BL8 750 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 MREGQ8N565 214 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 VCPIP1Q96JH7 1222 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 ZIM3Q96PE6 472 aa20.34■□□□□ 0.85
SMPD3-203ENST00000563226 FAM49AQ9H0Q0 323 aaPredicted RBP20.34■□□□□ 0.85
SMPD3-203ENST00000563226 PROSCO94903 275 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 ORC1Q13415 861 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 CLUL1Q15846 466 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 WDR72Q3MJ13 1102 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 ILDR2Q71H61 639 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 WDTC1Q8N5D0 677 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 EIF1ADQ8N9N8 165 aaKnown RBP20.33■□□□□ 0.85
SMPD3-203ENST00000563226 PIK3R5Q8WYR1 880 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 KAT2BQ92831 832 aa20.33■□□□□ 0.85
SMPD3-203ENST00000563226 SMYD3Q9H7B4 428 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms