RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TMEM130Q8N3G9 435 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 CXorf38Q8TB03 319 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 GOLGA5Q8TBA6 731 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 PPP2R3CQ969Q6 453 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 PABPC5Q96DU9 382 aaKnown RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 CDCA3Q99618 268 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 KIAA1586Q9HCI6 787 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 PRDM6Q9NQX0 595 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 ENTPD7Q9NQZ7 604 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 RMND1Q9NWS8 449 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 RBAKQ9NYW8 714 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 HOOK1Q9UJC3 728 aaKnown RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 ANK1P16157 1881 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 UNC80Q8N2C7 3258 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 ANO9A1A5B4 782 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 ZNF233A6NK53 670 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 RNF223E7ERA6 249 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PIRO00625 290 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 CLIC2O15247 247 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 XPOTO43592 962 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 CSPG5O95196 566 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 KIF20AO95235 890 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 SMC2O95347 1197 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 CXCL14O95715 111 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 GLP2RO95838 553 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 BMP6P22004 513 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 FGFR3P22607 806 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 NRIP1P48552 1158 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 GLUD2P49448 558 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 AARSP49588 968 aaKnown RBP eCLIP6.7□□□□□ -1.344e-11■■□□□ 13.1
CNOT1-204ENST00000563130 ELAVL2Q12926 359 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 SNRNP35Q16560 246 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 USP41Q3LFD5 358 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 RTP2Q5QGT7 225 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 EFHBQ8N7U6 833 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 XXYLT1Q8NBI6 393 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 VN1R2Q8NFZ6 395 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 HASPINQ8TF76 798 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 AUTS2Q8WXX7 1259 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 SMARCE1Q969G3 411 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 GBP4Q96PP9 640 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 TLE6Q9H808 572 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 RXFP1Q9HBX9 757 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 COG5Q9UP83 839 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 MAPK8IP1Q9UQF2 711 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 SSX2IPQ9Y2D8 614 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 BRWD1Q9NSI6 2320 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 FSD2A1L4K1 749 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PER2O15055 1255 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 C1RP00736 705 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 CNPP09543 421 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PRCPP42785 496 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 BRCC3P46736 316 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 MMP16P51512 607 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 GUCY2FP51841 1108 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 DLX2Q07687 328 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 BMS1Q14692 1282 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 TMEM132DQ14C87 1099 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 FAM171A1Q5VUB5 890 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 CENPPQ6IPU0 288 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 RBM23Q86U06 439 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 BEST2Q8NFU1 509 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 LNX1Q8TBB1 728 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PIK3R5Q8WYR1 880 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 B3GALT6Q96L58 329 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 MFSD14AQ96MC6 490 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 GTPBP4Q9BZE4 634 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 UBE2ZQ9H832 354 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PDE11AQ9HCR9 933 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 MRPL17Q9NRX2 175 aaKnown RBP6.7□□□□□ -1.34
CNOT1-204ENST00000563130 CLEC1BQ9P126 229 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 MAN1B1Q9UKM7 699 aa6.7□□□□□ -1.34
CNOT1-204ENST00000563130 PTPRJQ12913 1337 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 M0QZQ0 153 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PPEF2O14830 753 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 TEX28O15482 410 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 LINC01565O15544 149 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 TRAPPC3O43617 180 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CLASP2O75122 1294 aaKnown RBP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 TBX10O75333 385 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 NR3C1P04150 777 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 URODP06132 367 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CYP2J2P51589 502 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 LILRA4P59901 499 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CLDN10P78369 228 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CYP24A1Q07973 514 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 MORC3Q14149 939 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 MRPL58Q14197 206 aaKnown RBP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PSMD6Q15008 389 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 SURF1Q15526 300 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 EDRF1Q3B7T1 1238 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 C9orf57Q5W0N0 161 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 ADSSL1Q8N142 457 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 SLC22A17Q8WUG5 538 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 ATXN2LQ8WWM7 1075 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms