RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 MAPK13O15264 365 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 TAF6P49848 677 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 CLDN10P78369 228 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 RBP5P82980 135 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 TFF2Q03403 129 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 PSMD5Q16401 504 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 CTC1Q2NKJ3 1217 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 VARS2Q5ST30 1063 aaKnown RBP18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 TDRD10Q5VZ19 366 aaKnown RBP18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 CAVIN1Q6NZI2 390 aaKnown RBP18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 EFHBQ8N7U6 833 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 MLKLQ8NB16 471 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 TMC2Q8TDI7 906 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 EMILIN2Q9BXX0 1053 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 PCDHB8Q9UN66 801 aa18.82■□□□□ 0.6
CCNDBP1-204ENST00000563065 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 KPNA7A9QM74 516 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 SLC34A2O95436 690 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 C4BPAP04003 597 aaKnown RBP18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 SPATA31D3P0C874 917 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 EPB41P11171 864 aaKnown RBP18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 EPCAMP16422 314 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 PPP3CAQ08209 521 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 BFSP1Q12934 665 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 KCNC3Q14003 757 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 COL19A1Q14993 1142 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 SPATA31D4Q6ZUB0 917 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 PALB2Q86YC2 1186 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 SLC22A17Q8WUG5 538 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 HLA-CQ95604 372 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 PABPC5Q96DU9 382 aaKnown RBP18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 BARX2Q9UMQ3 279 aaPredicted RBP18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 SSX2IPQ9Y2D8 614 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 HCFC2Q9Y5Z7 792 aa18.81■□□□□ 0.6
CCNDBP1-204ENST00000563065 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 H3BQ06 376 aaPredicted RBP18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 CYB561D2O14569 222 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 SYN3O14994 580 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 TBX10O75333 385 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 VNN1O95497 513 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 KRT13P13646 458 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 GCLMP48507 274 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 MRPL58Q14197 206 aaKnown RBP18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 CLUL1Q15846 466 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 INTS8Q75QN2 995 aaKnown RBP18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 CDCA3Q99618 268 aaPredicted RBP18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 MKNK1Q9BUB5 465 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 SRRTQ9BXP5 876 aaKnown RBP18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 UBE2ZQ9H832 354 aaPredicted RBP18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 CLEC1BQ9P126 229 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 RWDD2AQ9UIY3 292 aa18.8■□□□□ 0.6
CCNDBP1-204ENST00000563065 PHACTR2O75167 634 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 KCNA5P22460 613 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 OR1D2P34982 312 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 CLCN4P51793 760 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 MYL6P60660 151 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 BIRC3Q13489 604 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 WSCD1Q658N2 575 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 SV2AQ7L0J3 742 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 FILIP1Q7Z7B0 1213 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 LRRC52Q8N7C0 313 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 APPL2Q8NEU8 664 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 FEZF2Q8TBJ5 459 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 HPDLQ96IR7 371 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 ZNF560Q96MR9 790 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 FNIP2Q9P278 1114 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 MTRRQ9UBK8 725 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 CDY1Q9Y6F8 540 aa18.79■□□□□ 0.6
CCNDBP1-204ENST00000563065 IKBKBO14920 756 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 SLC16A3O15427 465 aaKnown RBP18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 TBC1D4O60343 1298 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 LRRN2O75325 713 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 ADH1AP07327 375 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 PNPLA4P41247 253 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 NDUFV1P49821 464 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 SV2CQ496J9 727 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 C15orf39Q6ZRI6 1047 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 ANKS3Q6ZW76 656 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 GPR65Q8IYL9 337 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 CEP63Q96MT8 703 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 APOL5Q9BWW9 433 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.78■□□□□ 0.63e-10■■■■■ 57.7
CCNDBP1-204ENST00000563065 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 FBXL5Q9UKA1 691 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 SNX9Q9Y5X1 595 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 C5orf42Q9H799 3197 aa18.78■□□□□ 0.6
CCNDBP1-204ENST00000563065 TGM5O43548 720 aa18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 NCK2O43639 380 aa18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 ODC1P11926 461 aa18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 CDR1P51861 262 aa18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 ARPP19P56211 112 aa18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 MCCD1P59942 119 aaPredicted RBP18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 YWHAHQ04917 246 aaPredicted RBP18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 TRPC3Q13507 836 aa18.77■□□□□ 0.6
CCNDBP1-204ENST00000563065 ZACNQ401N2 412 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms