RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 IL1RAPL1Q9NZN1 696 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 GJA3Q9Y6H8 435 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 UMODL1Q5DID0 1318 aa14.85□□□□□ -0.03
GTF3C1-203ENST00000562609 A0A0A6YYK5 440 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 TPD52L2O43399 206 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 POTEJP0CG39 1038 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 R3HDM1Q15032 1099 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 ZNF554Q86TJ5 538 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 CCDC125Q86Z20 511 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 ARL10Q8N8L6 244 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 MBOAT7Q96N66 472 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 CATSPER2Q96P56 530 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 BHMT2Q9H2M3 363 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 TMOD4Q9NZQ9 345 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 TBC1D30Q9Y2I9 924 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 SH3GLB1Q9Y371 365 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 PCDHA3Q9Y5H8 950 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 KDM3AQ9Y4C1 1321 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 GSC2O15499 205 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 RNASEH1O60930 286 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 OR6B1O95007 311 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 POLD1P28340 1107 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 GJA8P48165 433 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 DAB2IPQ5VWQ8 1189 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 KLC3Q6P597 504 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 RFX8Q6ZV50 586 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 MTDHQ86UE4 582 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 MAP7D3Q8IWC1 876 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 SMYD1Q8NB12 490 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 ART4Q93070 314 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 MCUR1Q96AQ8 359 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 BARX2Q9UMQ3 279 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 DIS3Q9Y2L1 958 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 RGPD3A6NKT7 1758 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 RGPD4Q7Z3J3 1758 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 DDX39AO00148 427 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 CCDC22O60826 627 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 FOSP01100 380 aaPredicted RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 CHRNA3P32297 505 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 GALCP54803 685 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 SLC12A3P55017 1021 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 ADARP55265 1226 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 NPEPPSP55786 919 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 DSG1Q02413 1049 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 THOC5Q13769 683 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 DALRD3Q5D0E6 543 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 LDHDQ86WU2 507 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 PRELID2Q8N945 189 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 AGBL3Q8NEM8 1001 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 C10orf82Q8WW14 230 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 ALG3Q92685 438 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 BTBD10Q9BSF8 475 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 IKZF4Q9H2S9 585 aa14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 DNAJC17Q9NVM6 304 aaKnown RBP14.84□□□□□ -0.03
GTF3C1-203ENST00000562609 IGLV3-22A0A075B6J6 115 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 NFKBIEO00221 500 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 GYG2O15488 501 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 SLC9A1P19634 815 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 SULT2A1Q06520 285 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 HYIQ5T013 277 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 PHLDB3Q6NSJ2 640 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 CCDC137Q6PK04 289 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 NCCRP1Q6ZVX7 275 aaPredicted RBP14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 EPM2AIP1Q7L775 607 aaPredicted RBP14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 SATL1Q86VE3 508 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 TRIM59Q8IWR1 403 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 TPH2Q8IWU9 490 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 VPS52Q8N1B4 723 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 SLC35G2Q8TBE7 412 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 SCFD1Q8WVM8 642 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 CTNNBL1Q8WYA6 563 aaPredicted RBP14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 NAP1L4Q99733 375 aaKnown RBP14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 REEP2Q9BRK0 252 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 E2F6O75461 281 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 POLR2MP0CAP2 368 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 ERFP50548 548 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 NLRP9Q7RTR0 991 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 CLNKQ7Z7G1 428 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 PGAP2Q9UHJ9 254 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 VAV3Q9UKW4 847 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 DNM3Q9UQ16 869 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 NUMBLQ9Y6R0 609 aa14.83□□□□□ -0.04
GTF3C1-203ENST00000562609 PSME4Q14997 1843 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 MAGEB3O15480 346 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 UCHL3P15374 230 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 ABCB4P21439 1286 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 GRIA2P42262 883 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 MFSD4BQ5TF39 518 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 VPS36Q86VN1 386 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 SCUBE1Q8IWY4 988 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 CCDC65Q8IXS2 484 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 CCDC105Q8IYK2 499 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 PDCD7Q8N8D1 485 aaKnown RBP14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 CHURC1Q8WUH1 139 aa14.82□□□□□ -0.04
GTF3C1-203ENST00000562609 FNBP1Q96RU3 617 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms