RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 LRRN2O75325 713 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 CLSTN1O94985 981 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 EFEMP2O95967 443 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 SERPINC1P01008 464 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 KRT17Q04695 432 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 ELAVL2Q12926 359 aaKnown RBP16.89■□□□□ 0.29
SPG7-204ENST00000561911 TIGD5Q53EQ6 642 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 FKBP15Q5T1M5 1219 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 GBP6Q6ZN66 633 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 CCDC150Q8NCX0 1101 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 ARNTL2Q8WYA1 636 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 SUSD3Q96L08 255 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 SENP8Q96LD8 212 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 CRACR2AQ9BSW2 395 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 PI4K2AQ9BTU6 479 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 VN1R3Q9BXE9 311 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 INTS2Q9H0H0 1204 aaKnown RBP16.89■□□□□ 0.29
SPG7-204ENST00000561911 CERS4Q9HA82 394 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 TRIP11Q15643 1979 aa16.89■□□□□ 0.29
SPG7-204ENST00000561911 TDRD15B5MCY1 1934 aaKnown RBP16.88■□□□□ 0.29
SPG7-204ENST00000561911 TMEM265A0A087WTH1 108 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 A0A1B0GTH6 734 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 NOP14P78316 857 aaKnown RBP16.88■□□□□ 0.29
SPG7-204ENST00000561911 EXOC3L4Q17RC7 722 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 WDR72Q3MJ13 1102 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 FILIP1LQ4L180 1135 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 ZNF667Q5HYK9 610 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 WDR44Q5JSH3 913 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 DSTYKQ6XUX3 929 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 DDX53Q86TM3 631 aaKnown RBP16.88■□□□□ 0.29
SPG7-204ENST00000561911 RNF168Q8IYW5 571 aaPredicted RBP16.88■□□□□ 0.29
SPG7-204ENST00000561911 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 LMO3Q8TAP4 145 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 ELMO3Q96BJ8 720 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
SPG7-204ENST00000561911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.88■□□□□ 0.29
SPG7-204ENST00000561911 GDAP2Q9NXN4 497 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 SNX9Q9Y5X1 595 aa16.88■□□□□ 0.29
SPG7-204ENST00000561911 H3BNC9 293 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 M0QZQ0 153 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 UBXN1Q04323 297 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 UBE3AQ05086 875 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 GPM6BQ13491 265 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 FAM171A1Q5VUB5 890 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 SPOPLQ6IQ16 392 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
SPG7-204ENST00000561911 SPPL3Q8TCT6 385 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 NAP1L5Q96NT1 182 aaPredicted RBP16.87■□□□□ 0.29
SPG7-204ENST00000561911 HERC2P3Q9BVR0 1158 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 NIF3L1Q9GZT8 377 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 ZNF576Q9H609 170 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 APOBEC3GQ9HC16 384 aaKnown RBP16.87■□□□□ 0.29
SPG7-204ENST00000561911 ALG13Q9NP73 1137 aaKnown RBP16.87■□□□□ 0.29
SPG7-204ENST00000561911 NXF1Q9UBU9 619 aaKnown RBP16.87■□□□□ 0.29
SPG7-204ENST00000561911 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
SPG7-204ENST00000561911 PCDHB8Q9UN66 801 aa16.87■□□□□ 0.29
SPG7-204ENST00000561911 ARHGEF37A1IGU5 675 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 EPOPA6NHQ4 379 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 CYB561D2O14569 222 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 SYN3O14994 580 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 GRM6O15303 877 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 HUS1O60921 280 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 SOD2P04179 222 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 ODC1P11926 461 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 P4HA1P13674 534 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 FGFR3P22607 806 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 TNNC1P63316 161 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 LRMPQ12912 555 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 USP41Q3LFD5 358 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 TAS1R1Q7RTX1 841 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 TOP6BLQ8N6T0 577 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 NT5C1BQ96P26 610 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 TTPALQ9BTX7 342 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 IFNKQ9P0W0 207 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 L1RE1Q9UN81 338 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 POLIQ9UNA4 740 aa16.86■□□□□ 0.29
SPG7-204ENST00000561911 LAMA3Q16787 3333 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 CHD9Q3L8U1 2897 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 GBF1Q92538 1859 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 TEX33O43247 280 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 SLC9A1P19634 815 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 TYMPP19971 482 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 PON1P27169 355 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 TKTP29401 623 aaKnown RBP16.85■□□□□ 0.29
SPG7-204ENST00000561911 ASPAP45381 313 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 UBASH3AP57075 661 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 KCNMA1Q12791 1236 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 SYCP1Q15431 976 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 HABP4Q5JVS0 413 aaKnown RBP16.85■□□□□ 0.29
SPG7-204ENST00000561911 RTP2Q5QGT7 225 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 TRIM65Q6PJ69 517 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 SCARA5Q6ZMJ2 495 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 LIMS2Q7Z4I7 341 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 APPL2Q8NEU8 664 aa16.85■□□□□ 0.29
SPG7-204ENST00000561911 GDPD5Q8WTR4 605 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms