RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 RNF19BQ6ZMZ0 732 aa11.17□□□□□ -0.62
CLK3-205ENST00000561673 CD302Q8IX05 232 aa11.17□□□□□ -0.62
CLK3-205ENST00000561673 BEST2Q8NFU1 509 aa11.17□□□□□ -0.62
CLK3-205ENST00000561673 SEL1LQ9UBV2 794 aa11.17□□□□□ -0.62
CLK3-205ENST00000561673 AGO2Q9UKV8 859 aaKnown RBP11.17□□□□□ -0.62
CLK3-205ENST00000561673 KCNH3Q9ULD8 1083 aa11.17□□□□□ -0.62
CLK3-205ENST00000561673 CA14Q9ULX7 337 aa11.17□□□□□ -0.62
CLK3-205ENST00000561673 MYH11P35749 1972 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 FRMD3A2A2Y4 597 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 H0Y858 1186 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 PIRO00625 290 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 SPTLC2O15270 562 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 LRG1P02750 347 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 IDEP14735 1019 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 GAP43P17677 238 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 PTPN2P17706 415 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 AOC1P19801 751 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 CASP5P51878 434 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 GPC5P78333 572 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 TMEM132DQ14C87 1099 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 FOXD4L5Q5VV16 416 aaPredicted RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 C9orf57Q5W0N0 161 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 POTEHQ6S545 545 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 DSTYKQ6XUX3 929 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 PDILTQ8N807 584 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 GPR152Q8TDT2 470 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 FOXD4L4Q8WXT5 416 aaPredicted RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 ING5Q8WYH8 240 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 POMGNT1Q8WZA1 660 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 HVCN1Q96D96 273 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 ASB7Q9H672 318 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 AVENQ9NQS1 362 aaPredicted RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 SLC2A4RGQ9NR83 387 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 AFF4Q9UHB7 1163 aaKnown RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 MAFFQ9ULX9 164 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 DERAQ9Y315 318 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 MRPS23Q9Y3D9 190 aaKnown RBP11.16□□□□□ -0.62
CLK3-205ENST00000561673 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 INSL5Q9Y5Q6 135 aa11.16□□□□□ -0.62
CLK3-205ENST00000561673 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 CITO14578 2027 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 ANO9A1A5B4 782 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 SPTLC1O15269 473 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 PPP6R2O75170 966 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 GCNT3O95395 438 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 VNN2O95498 520 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 OR4Q2P0C623 313 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 CPB1P15086 417 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 POU5F1Q01860 360 aaKnown RBP11.15□□□□□ -0.62
CLK3-205ENST00000561673 TWF1Q12792 350 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 POSTNQ15063 836 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 MTSS1LQ765P7 747 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 USP37Q86T82 979 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 ATOH1Q92858 354 aaPredicted RBP11.15□□□□□ -0.62
CLK3-205ENST00000561673 TCEAL4Q96EI5 215 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 MCRS1Q96EZ8 462 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 SENP8Q96LD8 212 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.62
CLK3-205ENST00000561673 OXCT2Q9BYC2 517 aaPredicted RBP11.15□□□□□ -0.62
CLK3-205ENST00000561673 FGFBP2Q9BYJ0 223 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 OLFML3Q9NRN5 406 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 PANK4Q9NVE7 773 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 FAM86C1Q9NVL1 165 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 DPP3Q9NY33 737 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 GDE1Q9NZC3 331 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 CEP72Q9P209 647 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 EXOC7Q9UPT5 735 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 C2CD2Q9Y426 696 aa11.15□□□□□ -0.62
CLK3-205ENST00000561673 PIEZO1Q92508 2521 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 DOCK8Q8NF50 2099 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 OR6C75A6NL08 312 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 NRG2O14511 850 aaPredicted RBP11.14□□□□□ -0.63
CLK3-205ENST00000561673 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
CLK3-205ENST00000561673 PYGBP11216 843 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 CEBPBP17676 345 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 TYMPP19971 482 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 CCR2P41597 374 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 GPR17Q13304 367 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
CLK3-205ENST00000561673 PRSS36Q5K4E3 855 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 OVOS1Q6IE37 1185 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
CLK3-205ENST00000561673 EFCAB13Q8IY85 973 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 ZNF512Q96ME7 567 aaPredicted RBP11.14□□□□□ -0.63
CLK3-205ENST00000561673 PGLYRP2Q96PD5 576 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 TMEM209Q96SK2 561 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 RTP3Q9BQQ7 232 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 FAM213AQ9BRX8 229 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 CRISPLD1Q9H336 500 aa11.14□□□□□ -0.63
CLK3-205ENST00000561673 TBC1D17Q9HA65 648 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms