RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 KCNJ12Q14500 433 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 NCAPHQ15003 741 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 IQCB1Q15051 598 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 MAN2A1Q16706 1144 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 UPP1Q16831 310 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 ZACNQ401N2 412 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 PAN2Q504Q3 1202 aaKnown RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 TCP11X2Q5H9J9 407 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 GLRA4Q5JXX5 417 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 SPOUT1Q5T280 376 aaKnown RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 KRT39Q6A163 491 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 KCNT2Q6UVM3 1135 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 IRF2BP1Q8IU81 584 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 EFCAB13Q8IY85 973 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 GPR65Q8IYL9 337 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 AOPEPQ8N6M6 819 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 ZSWIM2Q8NEG5 633 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 TAF4BQ92750 862 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 SLC35C1Q96A29 364 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 TGS1Q96RS0 853 aaKnown RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 USB1Q9BQ65 265 aaKnown RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 C11orf84Q9BUA3 381 aaPredicted RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 PBX4Q9BYU1 374 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 IMPG2Q9BZV3 1241 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 FAM124BQ9H5Z6 455 aaPredicted RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 MIOSQ9NXC5 875 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 SPG21Q9NZD8 308 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 FAN1Q9Y2M0 1017 aa10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 MRPL42Q9Y6G3 142 aaKnown RBP10.68□□□□□ -0.7
KNSTRN-215ENST00000561367 CITO14578 2027 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 GTPBP10A4D1E9 387 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 LINC01553A4QN01 128 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 PIRO00625 290 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 DXOO77932 396 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 DDHD2O94830 711 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 AFPP02771 609 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 C4BPAP04003 597 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 CA3P07451 260 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 GALTP07902 379 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 ZNF18P17022 549 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 CDK11BP21127 795 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 BMPR1AP36894 532 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 MTIF2P46199 727 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 RPIAP49247 311 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 GATMP50440 423 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 MXI1P50539 228 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 AFF1P51825 1210 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 BCAR1P56945 870 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 PLCB3Q01970 1234 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 SV2CQ496J9 727 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 DCAF17Q5H9S7 520 aaPredicted RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 TCERG1LQ5VWI1 586 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 C9orf57Q5W0N0 161 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 C15orf39Q6ZRI6 1047 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 SV2AQ7L0J3 742 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 TRAPPC11Q7Z392 1133 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 TMCO2Q7Z6W1 182 aaPredicted RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 ZNF280BQ86YH2 543 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 DHX40Q8IX18 779 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 C1orf127Q8N9H9 656 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 COLGALT1Q8NBJ5 622 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 CCDC150Q8NCX0 1101 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 SPATA18Q8TC71 538 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 TIFAQ96CG3 184 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 EEF2KMTQ96G04 330 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 TMEM169Q96HH4 297 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 TUBGCP2Q9BSJ2 902 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 MTMR12Q9C0I1 747 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 VRTNQ9H8Y1 702 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 CBX8Q9HC52 389 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 FANCLQ9NW38 375 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 LIMA1Q9UHB6 759 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 PUF60Q9UHX1 559 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 COQ4Q9Y3A0 265 aa10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 FNDC1Q4ZHG4 1894 aaPredicted RBP10.67□□□□□ -0.7
KNSTRN-215ENST00000561367 PTPRSQ13332 1948 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 SF3B1O75533 1304 aaKnown RBP eCLIP10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 GRXCR1A8MXD5 290 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 PODXLO00592 558 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 NRP1O14786 923 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 PHACTR2O75167 634 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 B3GAT3O94766 335 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 ITGB3P05106 788 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 FAM163BP0C2L3 166 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 P4HA1P13674 534 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 OR1G1P47890 313 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 TAF6P49848 677 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 CLCNKBP51801 687 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 RABGGTBP53611 331 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 TAP1Q03518 808 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 KCNH2Q12809 1159 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 BIRC3Q13489 604 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 TRPC3Q13507 836 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 SGSM1Q2NKQ1 1148 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 FILIP1LQ4L180 1135 aa10.66□□□□□ -0.7
KNSTRN-215ENST00000561367 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms