RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 DIAPH3Q9NSV4 1193 aa7.02□□□□□ -1.29
LRRC28-220ENST00000561253 MCM9Q9NXL9 1143 aa7.02□□□□□ -1.29
LRRC28-220ENST00000561253 BTBD7Q9P203 1132 aa7.02□□□□□ -1.29
LRRC28-220ENST00000561253 HERC5Q9UII4 1024 aaKnown RBP7.02□□□□□ -1.29
LRRC28-220ENST00000561253 OTOFQ9HC10 1997 aa7.02□□□□□ -1.29
LRRC28-220ENST00000561253 NAV1Q8NEY1 1877 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 UBE2Q2LH0YL09 131 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 TMEM253P0C7T8 217 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 IGFBP6P24592 240 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-220ENST00000561253 MC4RP32245 332 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 MTMR1Q13613 665 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 VGLL4Q14135 290 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 SKIDA1Q1XH10 827 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 TTC38Q5R3I4 469 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 FRMD7Q6ZUT3 714 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 SYDE1Q6ZW31 735 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-220ENST00000561253 CILP2Q8IUL8 1156 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 PHYKPLQ8IUZ5 450 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 CALML6Q8TD86 181 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 IGDCC4Q8TDY8 1250 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 MAP4K1Q92918 833 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 DYNLL2Q96FJ2 89 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 TUBGCP5Q96RT8 1024 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 ZNF341Q9BYN7 854 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 ZDHHC5Q9C0B5 715 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 MS4A5Q9H3V2 200 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 INCENPQ9NQS7 918 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 USP36Q9P275 1121 aaKnown RBP7.01□□□□□ -1.29
LRRC28-220ENST00000561253 ARPP21Q9UBL0 812 aaPredicted RBP7.01□□□□□ -1.29
LRRC28-220ENST00000561253 SERPINB13Q9UIV8 391 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 MSRAQ9UJ68 235 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 AK9Q5TCS8 1911 aa7.01□□□□□ -1.29
LRRC28-220ENST00000561253 BAZ2AQ9UIF9 1905 aaKnown RBP7.01□□□□□ -1.29
LRRC28-220ENST00000561253 MYH1P12882 1939 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 IGKV6D-41A0A0C4DH26 115 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 ETV2O00321 342 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 KDM1AO60341 852 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 FARP2O94887 1054 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 LIMS1P48059 325 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 NOVP48745 357 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 ITGA1P56199 1179 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 HUNKP57058 714 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 PPARAQ07869 468 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 MOGSQ13724 837 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 SLC4A8Q2Y0W8 1093 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 TIGD7Q6NT04 549 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 RTN4RL1Q86UN2 441 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 STK32CQ86UX6 486 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 RASAL3Q86YV0 1011 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 SIAH1Q8IUQ4 282 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 TBC1D10CQ8IV04 446 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 WDR48Q8TAF3 677 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 ZKSCAN4Q969J2 545 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 FOXRED1Q96CU9 486 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 CLIC6Q96NY7 704 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 WRNIP1Q96S55 665 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 GORASP1Q9BQQ3 440 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 TRIM8Q9BZR9 551 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 VTA1Q9NP79 307 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 ARHGAP20Q9P2F6 1191 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 FRMD4AQ9P2Q2 1039 aaPredicted RBP7□□□□□ -1.29
LRRC28-220ENST00000561253 KCNG1Q9UIX4 513 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 WASF3Q9UPY6 502 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 IRAK3Q9Y616 596 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 THSD7BQ9C0I4 1608 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 CENPFP49454 3210 aa7□□□□□ -1.29
LRRC28-220ENST00000561253 GREB1LQ9C091 1923 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-220ENST00000561253 PLIN4Q96Q06 1357 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 ORC4O43929 436 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 CTNND1O60716 968 aaKnown RBP6.99□□□□□ -1.29
LRRC28-220ENST00000561253 HLA-DOAP06340 250 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 CYP21A2P08686 494 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 AKR1B1P15121 316 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 NF2P35240 595 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 SLC6A3Q01959 620 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 PRKG1Q13976 671 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 NECTIN1Q15223 517 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 PLEKHG6Q3KR16 790 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 SYDE2Q5VT97 1194 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 RGMBQ6NW40 437 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 STOX1Q6ZVD7 989 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 ARMC9Q7Z3E5 817 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 SCYL3Q8IZE3 742 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 DTX3Q8N9I9 347 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 RUFY2Q8WXA3 655 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 HOOK2Q96ED9 719 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 IL17RAQ96F46 866 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 FAM84AQ96KN4 292 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 SIGLEC10Q96LC7 697 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 ZSWIM3Q96MP5 696 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 SMAD5Q99717 465 aaKnown RBP6.99□□□□□ -1.29
LRRC28-220ENST00000561253 FOXB1Q99853 325 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 SYT3Q9BQG1 590 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 C11orf84Q9BUA3 381 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-220ENST00000561253 MENTQ9BUN1 341 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 NAPBQ9H115 298 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 TOPORSQ9NS56 1045 aaPredicted RBP6.99□□□□□ -1.29
LRRC28-220ENST00000561253 C14orf119Q9NWQ9 140 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 GALNT8Q9NY28 637 aa6.99□□□□□ -1.29
LRRC28-220ENST00000561253 TRHDEQ9UKU6 1024 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms