RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 SLC8B1Q6J4K2 584 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 PLEKHO2Q8TD55 490 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 NOC3LQ8WTT2 800 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 SENP8Q96LD8 212 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 GSDMAQ96QA5 445 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 PLEKHA4Q9H4M7 779 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 PRKAG3Q9UGI9 489 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 MAPK8IP1Q9UQF2 711 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 TIMM13Q9Y5L4 95 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 CDY1Q9Y6F8 540 aa16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 MTCL1Q9Y4B5 1905 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-213ENST00000560856 OAZ2O95190 189 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 TYMPP19971 482 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 PAX3P23760 479 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 UBE2HP62256 183 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 SURF1Q15526 300 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 NFIL3Q16649 462 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 ZCWPW2Q504Y3 356 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 COBLL1Q53SF7 1204 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 TMC5Q6UXY8 1006 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 GPR149Q86SP6 731 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 ADHFE1Q8IWW8 467 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 SMYD4Q8IYR2 804 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 KREMEN2Q8NCW0 462 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 ZNF707Q96C28 371 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 RHOBTB2Q9BYZ6 727 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 MTMR12Q9C0I1 747 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 SFXN1Q9H9B4 322 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 FBXL5Q9UKA1 691 aa16.5■□□□□ 0.23
SNRPA1-213ENST00000560856 EXOC3O60645 756 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 RFPL2O75678 378 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 ABLIM3O94929 683 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 NR3C1P04150 777 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 ITGB3P05106 788 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 CYP11A1P05108 521 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 WEE2P0C1S8 567 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 POLR2BP30876 1174 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 CASP4P49662 377 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 ROR1Q01973 937 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 CBX2Q14781 532 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 DSTYKQ6XUX3 929 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 WDR49Q8IV35 697 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 ZNF516Q92618 1163 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 POP1Q99575 1024 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 AGAP1Q9UPQ3 857 aa16.49■□□□□ 0.23
SNRPA1-213ENST00000560856 WDR27A2RRH5 827 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 H7C4K7 107 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 ZMYND10O75800 440 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 KIF20AO95235 890 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 SMC2O95347 1197 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 PRCPP42785 496 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 TAF6P49848 677 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 CLDN10P78369 228 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 CTXN3Q4LDR2 81 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 ZNF658Q5TYW1 1059 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 CSGALNACT2Q8N6G5 542 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 LRRC52Q8N7C0 313 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 SMARCE1Q969G3 411 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 CGRRF1Q99675 332 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 PHF7Q9BWX1 381 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 POMKQ9H5K3 350 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 RMND1Q9NWS8 449 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 DPP7Q9UHL4 492 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 MAN1B1Q9UKM7 699 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 ITGA11Q9UKX5 1188 aa16.48■□□□□ 0.23
SNRPA1-213ENST00000560856 DOCK6Q96HP0 2047 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 CCDC195A0A1B0GUA6 201 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 KPNA7A9QM74 516 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 CYB561D2O14569 222 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 TMEM191BP0C7N4 346 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 BMP6P22004 513 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 MTHFRP42898 656 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 MCCD1P59942 119 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 RBP5P82980 135 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 CENPPQ6IPU0 288 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 ZNF280DQ6N043 979 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 CES5AQ6NT32 575 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 TRAPPC11Q7Z392 1133 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 GJD3Q8N144 294 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 ZNF461Q8TAF7 563 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 CCDC127Q96BQ5 260 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 ANKRD36BP1Q96IX9 119 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 RTP3Q9BQQ7 232 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 ZDHHC7Q9NXF8 308 aa16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-213ENST00000560856 CALUO43852 315 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms