RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CMASQ8NFW8 434 aaPredicted RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 SCFD1Q8WVM8 642 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 PRKD2Q9BZL6 878 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 KIAA1586Q9HCI6 787 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 PDE11AQ9HCR9 933 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 AGPAT3Q9NRZ7 376 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 HSPBP1Q9NZL4 362 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 FBXL5Q9UKA1 691 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 UBE4BO95155 1302 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 ANK1P16157 1881 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 C2orf16Q68DN1 1984 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 ARHGEF37A1IGU5 675 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 FAM86C2PA6NEL3 165 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 M0QZQ0 153 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 CCL16O15467 120 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 XYLBO75191 536 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 HOXD13P35453 343 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 TAF6P49848 677 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 EHHADHQ08426 723 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 PSMD2Q13200 908 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 KNOP1Q1ED39 458 aaKnown RBP14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 OVOS1Q6IE37 1185 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 SLC8B1Q6J4K2 584 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 CYP26C1Q6V0L0 522 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 KRBA2Q6ZNG9 492 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 OTOP3Q7RTS5 596 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 METTL23Q86XA0 190 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 CBWD2Q8IUF1 395 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 CSGALNACT2Q8N6G5 542 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 ZNF461Q8TAF7 563 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 SENP8Q96LD8 212 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 CYP4F11Q9HBI6 524 aa14.02□□□□□ -0.17
CTDSPL2-209ENST00000560620 CLUHO75153 1309 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 ANO9A1A5B4 782 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 WDR27A2RRH5 827 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 PIRO00625 290 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 TGFB1I1O43294 461 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 KLRC4O43908 158 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 TNNC2P02585 160 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 LRG1P02750 347 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 ITGB3P05106 788 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 HNRNPA1P09651 372 aaKnown RBP eCLIP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 PAX3P23760 479 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 ANP32AP39687 249 aaKnown RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 WNT7BP56706 349 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 MRPL58Q14197 206 aaKnown RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 SURF1Q15526 300 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 SNRNP35Q16560 246 aaKnown RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 UVSSAQ2YD98 709 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 SV2CQ496J9 727 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 TMEM31Q5JXX7 168 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 LMBRD2Q68DH5 695 aaPredicted RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 GET4Q7L5D6 327 aaPredicted RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 GRASPQ7Z6J2 395 aaPredicted RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 ZNF707Q96C28 371 aaPredicted RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 ANKRD36BP1Q96IX9 119 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 ZNF560Q96MR9 790 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 FNBP1Q96RU3 617 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 WDR6Q9NNW5 1121 aaKnown RBP14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 LIMD1Q9UGP4 676 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 AGAP1Q9UPQ3 857 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 USTQ9Y2C2 406 aa14.01□□□□□ -0.17
CTDSPL2-209ENST00000560620 FAM237AA0A1B0GTK4 181 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 KPNA7A9QM74 516 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 CYB561D2O14569 222 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 SPTLC1O15269 473 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 EXOC3O60645 756 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 CLSTN1O94985 981 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 KIF20AO95235 890 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 DLATP10515 647 aaKnown RBP14□□□□□ -0.17
CTDSPL2-209ENST00000560620 ATF2P15336 505 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 PNPLA4P41247 253 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 AARSP49588 968 aaKnown RBP eCLIP14□□□□□ -0.17
CTDSPL2-209ENST00000560620 SNRPFP62306 86 aaKnown RBP14□□□□□ -0.17
CTDSPL2-209ENST00000560620 ADCY1Q08828 1119 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 STK4Q13043 487 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 XXYLT1Q8NBI6 393 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 GOLGA5Q8TBA6 731 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 PGLYRP2Q96PD5 576 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 OXCT2Q9BYC2 517 aaPredicted RBP14□□□□□ -0.17
CTDSPL2-209ENST00000560620 MTMR12Q9C0I1 747 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 CGNQ9P2M7 1197 aaKnown RBP14□□□□□ -0.17
CTDSPL2-209ENST00000560620 ITGA11Q9UKX5 1188 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 DSEQ9UL01 958 aa14□□□□□ -0.17
CTDSPL2-209ENST00000560620 OR6C75A6NL08 312 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 OAZ2O95190 189 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 ASGR2P07307 311 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 OR4Q2P0C623 313 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 TNNI1P19237 187 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 TYMPP19971 482 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 FSHRP23945 695 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 HOXA9P31269 272 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 NTHL1P78549 312 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 DPYDQ12882 1025 aa13.99□□□□□ -0.17
CTDSPL2-209ENST00000560620 BFSP1Q12934 665 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms