RNA–Protein interactions for RNA: ENST00000560541.5

CUX1-218, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 3,176 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-218ENST00000560541 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
CUX1-218ENST00000560541 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
CUX1-218ENST00000560541 GSTA1P08263 222 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 CFHP08603 1231 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
CUX1-218ENST00000560541 STX2P32856 288 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 ALDH5A1P51649 535 aaPredicted RBP12.01□□□□□ -0.49
CUX1-218ENST00000560541 CLEC16AQ2KHT3 1053 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 ZNF568Q3ZCX4 644 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 SERPINB12Q96P63 405 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 PLVAPQ9BX97 442 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 TMEM8AQ9HCN3 771 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 GALNT8Q9NY28 637 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 HERC5Q9UII4 1024 aaKnown RBP12.01□□□□□ -0.49
CUX1-218ENST00000560541 LRRD1A4D1F6 860 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 A6NHS1 94 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 SUN1O94901 812 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 CD58P19256 250 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 ITIH2P19823 946 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 ALCAMQ13740 583 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 SLC39A4Q6P5W5 647 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 FITM2Q8N6M3 262 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 TMEM161BQ8NDZ6 487 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 KIFAP3Q92845 792 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 VTI1AQ96AJ9 217 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 KLHL29Q96CT2 875 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 FAM213AQ9BRX8 229 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 DCLK3Q9C098 648 aa12.01□□□□□ -0.49
CUX1-218ENST00000560541 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
CUX1-218ENST00000560541 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
CUX1-218ENST00000560541 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
CUX1-218ENST00000560541 HNRNPDLO14979 420 aaKnown RBP12□□□□□ -0.49
CUX1-218ENST00000560541 RAD17O75943 681 aa12□□□□□ -0.49
CUX1-218ENST00000560541 GAS8O95995 478 aa12□□□□□ -0.49
CUX1-218ENST00000560541 OAS1P00973 400 aaKnown RBP12□□□□□ -0.49
CUX1-218ENST00000560541 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
CUX1-218ENST00000560541 TMED2Q15363 201 aa12□□□□□ -0.49
CUX1-218ENST00000560541 ZFYVE27Q5T4F4 411 aa12□□□□□ -0.49
CUX1-218ENST00000560541 TAAR1Q96RJ0 339 aa12□□□□□ -0.49
CUX1-218ENST00000560541 C11orf70Q9BRQ4 267 aa12□□□□□ -0.49
CUX1-218ENST00000560541 KMT5AQ9NQR1 393 aa12□□□□□ -0.49
CUX1-218ENST00000560541 SLC5A4Q9NY91 659 aa12□□□□□ -0.49
CUX1-218ENST00000560541 SPAG7O75391 227 aa12□□□□□ -0.49
CUX1-218ENST00000560541 CCNE2O96020 404 aa12□□□□□ -0.49
CUX1-218ENST00000560541 KRT16P08779 473 aa12□□□□□ -0.49
CUX1-218ENST00000560541 GPC3P51654 580 aa12□□□□□ -0.49
CUX1-218ENST00000560541 DMP1Q13316 513 aaPredicted RBP12□□□□□ -0.49
CUX1-218ENST00000560541 SETDB1Q15047 1291 aa12□□□□□ -0.49
CUX1-218ENST00000560541 TAF11Q15544 211 aa12□□□□□ -0.49
CUX1-218ENST00000560541 ANKS1BQ7Z6G8 1248 aa12□□□□□ -0.49
CUX1-218ENST00000560541 MCOLN2Q8IZK6 566 aa12□□□□□ -0.49
CUX1-218ENST00000560541 NAALADL1Q9UQQ1 740 aa12□□□□□ -0.49
CUX1-218ENST00000560541 ZNF536O15090 1300 aa12□□□□□ -0.49
CUX1-218ENST00000560541 PI4K2BG5E9Z4 385 aa12□□□□□ -0.49
CUX1-218ENST00000560541 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
CUX1-218ENST00000560541 CAP2P40123 477 aa12□□□□□ -0.49
CUX1-218ENST00000560541 HSD17B4P51659 736 aa12□□□□□ -0.49
CUX1-218ENST00000560541 NCKAP1LP55160 1127 aa12□□□□□ -0.49
CUX1-218ENST00000560541 PTK6Q13882 451 aa12□□□□□ -0.49
CUX1-218ENST00000560541 KAZNQ674X7 775 aa12□□□□□ -0.49
CUX1-218ENST00000560541 ZNF365Q70YC5 407 aa12□□□□□ -0.49
CUX1-218ENST00000560541 GSTA5Q7RTV2 222 aa12□□□□□ -0.49
CUX1-218ENST00000560541 SAPCD2Q86UD0 394 aa12□□□□□ -0.49
CUX1-218ENST00000560541 SPOCK2Q92563 424 aa12□□□□□ -0.49
CUX1-218ENST00000560541 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
CUX1-218ENST00000560541 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
CUX1-218ENST00000560541 TELO2Q9Y4R8 837 aa12□□□□□ -0.49
CUX1-218ENST00000560541 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 TAS2R40P59535 323 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 IZUMO3Q5VZ72 239 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 SDCCAG8Q86SQ7 713 aaPredicted RBP11.99□□□□□ -0.49
CUX1-218ENST00000560541 GLIS1Q8NBF1 620 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 CKAP2Q8WWK9 683 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 CLEC4DQ8WXI8 215 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
CUX1-218ENST00000560541 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.99□□□□□ -0.49
CUX1-218ENST00000560541 ADGRA3Q8IWK6 1321 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 ICAM1P05362 532 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 UNGP13051 313 aaPredicted RBP11.99□□□□□ -0.49
CUX1-218ENST00000560541 NSFP46459 744 aaKnown RBP11.99□□□□□ -0.49
CUX1-218ENST00000560541 CYP24A1Q07973 514 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 MGAT5Q09328 741 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 ATP13A4Q4VNC1 1196 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 ANO5Q75V66 913 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 FAM160B2Q86V87 743 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 ZNF70Q9UC06 446 aaPredicted RBP11.99□□□□□ -0.49
CUX1-218ENST00000560541 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 EXOC7Q9UPT5 735 aa11.99□□□□□ -0.49
CUX1-218ENST00000560541 RASA4BC9J798 803 aa11.98□□□□□ -0.49
CUX1-218ENST00000560541 H0YIN7 160 aa11.98□□□□□ -0.49
CUX1-218ENST00000560541 RASA4O43374 803 aa11.98□□□□□ -0.49
CUX1-218ENST00000560541 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
CUX1-218ENST00000560541 KRT10P13645 584 aa11.98□□□□□ -0.49
CUX1-218ENST00000560541 ATP5DP30049 168 aa11.98□□□□□ -0.49
CUX1-218ENST00000560541 COPS2P61201 443 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms