RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BMP6P22004 513 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 ATICP31939 592 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 GTF2H1P32780 548 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 CA8P35219 290 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 ADAM15Q13444 863 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 KCNC3Q14003 757 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 CCDC85BQ15834 202 aaPredicted RBP15.08■□□□□ 0
PKNOX1-209ENST00000560448 ADGRD2Q7Z7M1 963 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 FAM186BQ8IYM0 893 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 LNX1Q8TBB1 728 aaPredicted RBP15.08■□□□□ 0
PKNOX1-209ENST00000560448 ATXN2LQ8WWM7 1075 aaKnown RBP15.08■□□□□ 0
PKNOX1-209ENST00000560448 RIN2Q8WYP3 895 aaPredicted RBP15.08■□□□□ 0
PKNOX1-209ENST00000560448 KLHL5Q96PQ7 755 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 MTMR12Q9C0I1 747 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 DZANK1Q9NVP4 752 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 MTRRQ9UBK8 725 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 CACNG4Q9UBN1 327 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 MAFFQ9ULX9 164 aa15.08■□□□□ 0
PKNOX1-209ENST00000560448 KPNA7A9QM74 516 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 PPP1R3GB7ZBB8 358 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 BIN1O00499 593 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 OAZ2O95190 189 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 ITGB3P05106 788 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 CYP11A1P05108 521 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 FAM163BP0C2L3 166 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 KLRC2P26717 231 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 VAMP7P51809 220 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 YWHAHQ04917 246 aaPredicted RBP15.07■□□□□ 0
PKNOX1-209ENST00000560448 BFSP1Q12934 665 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 MRPL58Q14197 206 aaKnown RBP15.07■□□□□ 0
PKNOX1-209ENST00000560448 PSMD5Q16401 504 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 RTP2Q5QGT7 225 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 ANKRD40Q6AI12 368 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 ZNF280DQ6N043 979 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 SASS6Q6UVJ0 657 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 DSTYKQ6XUX3 929 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 DPH6Q7L8W6 267 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 CEP57Q86XR8 500 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 CSGALNACT2Q8N6G5 542 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 NELFBQ8WX92 580 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 RABGGTAQ92696 567 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 CCDC127Q96BQ5 260 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 UBE2ZQ9H832 354 aaPredicted RBP15.07■□□□□ 0
PKNOX1-209ENST00000560448 GDAP2Q9NXN4 497 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 RWDD2AQ9UIY3 292 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 FAM50BQ9Y247 325 aa15.07■□□□□ 0
PKNOX1-209ENST00000560448 C2CD2LO14523 706 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 TEX28O15482 410 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 CLASP2O75122 1294 aaKnown RBP15.06■□□□□ 0
PKNOX1-209ENST00000560448 GLUD1P00367 558 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 CNPP09543 421 aaKnown RBP15.06■□□□□ 0
PKNOX1-209ENST00000560448 ERCC5P28715 1186 aaPredicted RBP15.06■□□□□ 0
PKNOX1-209ENST00000560448 POLR2BP30876 1174 aaKnown RBP15.06■□□□□ 0
PKNOX1-209ENST00000560448 BRCC3P46736 316 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 WNT7BP56706 349 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 VARS2Q5ST30 1063 aaKnown RBP15.06■□□□□ 0
PKNOX1-209ENST00000560448 SLC8B1Q6J4K2 584 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 TTI2Q6NXR4 508 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 CYP26C1Q6V0L0 522 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 TAS1R1Q7RTX1 841 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 TRAPPC11Q7Z392 1133 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 FILIP1Q7Z7B0 1213 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 RBM23Q86U06 439 aaKnown RBP15.06■□□□□ 0
PKNOX1-209ENST00000560448 METTL23Q86XA0 190 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 TMEM86AQ8N2M4 240 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 CXorf38Q8TB03 319 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 PPM1EQ8WY54 764 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 PLEKHA4Q9H4M7 779 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 VRTNQ9H8Y1 702 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 CLDND1Q9NY35 253 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 HCFC2Q9Y5Z7 792 aa15.06■□□□□ 0
PKNOX1-209ENST00000560448 OR6C75A6NL08 312 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 LRRIQ3A6PVS8 624 aaPredicted RBP15.05■□□□□ -0
PKNOX1-209ENST00000560448 CAVIN2O95810 425 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 KRT19P08727 400 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
PKNOX1-209ENST00000560448 TKTP29401 623 aaKnown RBP15.05■□□□□ -0
PKNOX1-209ENST00000560448 CASP4P49662 377 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 CLCN4P51793 760 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 NLRP12P59046 1061 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 SMARCB1Q12824 385 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 TRPC3Q13507 836 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 LEXMQ3ZCV2 418 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 ZACNQ401N2 412 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 ANO6Q4KMQ2 910 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 ISM2Q6H9L7 571 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 KLHL10Q6JEL2 608 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 FRMD5Q7Z6J6 570 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 TOP6BLQ8N6T0 577 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 OR5B17Q8NGF7 314 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 ANP32BQ92688 251 aaKnown RBP15.05■□□□□ -0
PKNOX1-209ENST00000560448 TAF4BQ92750 862 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 FAXDC2Q96IV6 333 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 SENP8Q96LD8 212 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 RHOBTB2Q9BYZ6 727 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 AGAP1Q9UPQ3 857 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 VWA8A3KMH1 1905 aa15.05■□□□□ -0
PKNOX1-209ENST00000560448 MYO7AQ13402 2215 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 PER2O15055 1255 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms