RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 KRT19P08727 400 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 EEF1GP26641 437 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 PBX3P40426 434 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 NDUFV1P49821 464 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 PMS1P54277 932 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 TYRO3Q06418 890 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 SPAG1Q07617 926 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 BIRC3Q13489 604 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 KIAA0319Q5VV43 1072 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 ZSWIM2Q8NEG5 633 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 HPDLQ96IR7 371 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 FAM161BQ96MY7 647 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 GUCD1Q96NT3 240 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 PAAF1Q9BRP4 392 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 CXCL16Q9H2A7 254 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 RXFP1Q9HBX9 757 aa12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-215ENST00000560207 TULP1O00294 542 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 OAZ2O95190 189 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 CYP11A1P05108 521 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 POLR2BP30876 1174 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 STX17P56962 302 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 MYL5Q02045 173 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 TCERG1LQ5VWI1 586 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 C15orf39Q6ZRI6 1047 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 Q7L0L9 218 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 THEM5Q8N1Q8 247 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 TOP6BLQ8N6T0 577 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 FBXL13Q8NEE6 735 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 MYLIPQ8WY64 445 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 FAM81BQ96LP2 452 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 GPR62Q9BZJ7 368 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 TLE6Q9H808 572 aa12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
RABGGTA-215ENST00000560207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 C2orf71A6NGG8 1288 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 OR6C75A6NL08 312 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 LILRB3O75022 631 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 LHX1P48742 406 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 MXI1P50539 228 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 ERVFC1P60507 584 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 TNNC1P63316 161 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 TPM4P67936 248 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 YWHAHQ04917 246 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 NCOA4Q13772 614 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 CAMK1Q14012 370 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 PTPN14Q15678 1187 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 PSMD5Q16401 504 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 WDR44Q5JSH3 913 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 CD300LGQ6UXG3 332 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 TRIM59Q8IWR1 403 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 C3orf58Q8NDZ4 430 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 CXorf38Q8TB03 319 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 SLC35C1Q96A29 364 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 SENP8Q96LD8 212 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 MTRRQ9UBK8 725 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 COG5Q9UP83 839 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 COQ4Q9Y3A0 265 aa12.96□□□□□ -0.33
RABGGTA-215ENST00000560207 TSC2P49815 1807 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 MYO7AQ13402 2215 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 RFXAPO00287 272 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 CYB561D2O14569 222 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 DNAJB1P25685 340 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 WNT7BP56706 349 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 MYL7Q01449 175 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 ADGRE1Q14246 886 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 DCAF17Q5H9S7 520 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 PLPP4Q5VZY2 271 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 TPGS2Q68CL5 300 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 CYP26C1Q6V0L0 522 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 TMEM184AQ6ZMB5 413 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 EFHBQ8N7U6 833 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 CASP10Q92851 521 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 CNOT6LQ96LI5 555 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 POP1Q99575 1024 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 VN1R3Q9BXE9 311 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 GZF1Q9H116 711 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 PLEKHA4Q9H4M7 779 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 DZANK1Q9NVP4 752 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 HSFX1Q9UBD0 423 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 SIX4Q9UIU6 781 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 NFE2L3Q9Y4A8 694 aa12.95□□□□□ -0.34
RABGGTA-215ENST00000560207 PTPRJQ12913 1337 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms