RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 SRGAP2BP0DMP2 458 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 BMP6P22004 513 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 SP100P23497 879 aaPredicted RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 NR2F2P24468 414 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 TAF6P49848 677 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 POU5F1Q01860 360 aaKnown RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 BIRC3Q13489 604 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 KCNC3Q14003 757 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 MORC3Q14149 939 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 SURF1Q15526 300 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 TJAP1Q5JTD0 557 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 WSCD1Q658N2 575 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 CLEC17AQ6ZS10 378 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 ANKS3Q6ZW76 656 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 METTL23Q86XA0 190 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 C12orf56Q8IXR9 622 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 ELOA2Q8IYF1 753 aaPredicted RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 FAM186BQ8IYM0 893 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 ADSSL1Q8N142 457 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 KREMEN2Q8NCW0 462 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 APPL2Q8NEU8 664 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 MSLNLQ96KJ4 702 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 MFSD14AQ96MC6 490 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 TMEM209Q96SK2 561 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 CGRRF1Q99675 332 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 TSG101Q99816 390 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 S1PR5Q9H228 398 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 CLSTN2Q9H4D0 955 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 MAN1C1Q9NR34 630 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.23□□□□□ -0.93
USP3-217ENST00000560070 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 SIX4Q9UIU6 781 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 USP15Q9Y4E8 981 aaPredicted RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 PTPRSQ13332 1948 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 SYN3O14994 580 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 CETN3O15182 167 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 TRIM49P0CI25 452 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 TRIM49CP0CI26 452 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 KRT13P13646 458 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 RPL13P26373 211 aaKnown RBP9.22□□□□□ -0.93
USP3-217ENST00000560070 ELF1P32519 619 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 PSMC2P35998 433 aaKnown RBP9.22□□□□□ -0.93
USP3-217ENST00000560070 VAMP7P51809 220 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 MYL6P60660 151 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 YWHAHQ04917 246 aaPredicted RBP9.22□□□□□ -0.93
USP3-217ENST00000560070 TRPC3Q13507 836 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 STIM1Q13586 685 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 MRPL58Q14197 206 aaKnown RBP9.22□□□□□ -0.93
USP3-217ENST00000560070 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 SV2CQ496J9 727 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 OVOS1Q6IE37 1185 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 CENPPQ6IPU0 288 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 PDXDC1Q6P996 788 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 LILRA6Q6PI73 481 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 TMEM184AQ6ZMB5 413 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 NT5DC4Q86YG4 428 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 CREBRFQ8IUR6 639 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 WDR49Q8IV35 697 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 GPT2Q8TD30 523 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 PARD3BQ8TEW8 1205 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 NELFBQ8WX92 580 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 BORCS6Q96GS4 357 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 HPDLQ96IR7 371 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 RPGRIP1Q96KN7 1286 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 PGLYRP2Q96PD5 576 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 MMS19Q96T76 1030 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 GZF1Q9H116 711 aaPredicted RBP9.22□□□□□ -0.93
USP3-217ENST00000560070 PIDD1Q9HB75 910 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 MTRRQ9UBK8 725 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 ITGA11Q9UKX5 1188 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 POLIQ9UNA4 740 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 CTNND2Q9UQB3 1225 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 SNX9Q9Y5X1 595 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 BACE2Q9Y5Z0 518 aa9.22□□□□□ -0.93
USP3-217ENST00000560070 M0QZQ0 153 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 PSMA7O14818 248 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 CCL16O15467 120 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 HUS1O60921 280 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 SEC24AO95486 1093 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 PDGFRBP09619 1106 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 ODC1P11926 461 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 CPB1P15086 417 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 HOXB8P17481 243 aaPredicted RBP9.21□□□□□ -0.94
USP3-217ENST00000560070 CCNE1P24864 410 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 GCLMP48507 274 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 CREMQ03060 361 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 MYO1EQ12965 1108 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 RAB33AQ14088 237 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 ATAT1Q5SQI0 421 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 TCERG1LQ5VWI1 586 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 CES5AQ6NT32 575 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 RNF19BQ6ZMZ0 732 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 THEM5Q8N1Q8 247 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 CXorf38Q8TB03 319 aa9.21□□□□□ -0.94
USP3-217ENST00000560070 ADAMTS19Q8TE59 1207 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms