RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LAIR1Q6GTX8 287 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 POTEHQ6S545 545 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 ZNF687Q8N1G0 1237 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 CCDC47Q96A33 483 aaKnown RBP22.38■■□□□ 1.17
PSEN1-225ENST00000560005 RBSNQ9H1K0 784 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 CXCL16Q9H2A7 254 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 CHRDQ9H2X0 955 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 DACH1Q9UI36 760 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 PCDHA5Q9Y5H7 936 aa22.38■■□□□ 1.17
PSEN1-225ENST00000560005 DGAT1O75907 488 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 SLITRK3O94933 977 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 THP07101 528 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 CEBPBP17676 345 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 PNOCQ13519 176 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.37■■□□□ 1.17
PSEN1-225ENST00000560005 PRR23BQ6ZRT6 265 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 CELF5Q8N6W0 485 aaKnown RBP22.37■■□□□ 1.17
PSEN1-225ENST00000560005 DNASE1L2Q92874 299 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 ELSPBP1Q96BH3 223 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 MMTAG2Q9BU76 263 aaKnown RBP22.37■■□□□ 1.17
PSEN1-225ENST00000560005 RMND1Q9NWS8 449 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 SNTG2Q9NY99 539 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 MTRRQ9UBK8 725 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 CDY1Q9Y6F8 540 aa22.37■■□□□ 1.17
PSEN1-225ENST00000560005 PP2D1A8MPX8 630 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 PLCG1P19174 1290 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 CCT6AP40227 531 aaKnown RBP22.36■■□□□ 1.17
PSEN1-225ENST00000560005 GRM2Q14416 872 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 NAB2Q15742 525 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 ANO6Q4KMQ2 910 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 SPATA20Q8TB22 786 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 POLR3FQ9H1D9 316 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-225ENST00000560005 KBTBD4Q9NVX7 518 aa22.36■■□□□ 1.17
PSEN1-225ENST00000560005 MAN2B1O00754 1011 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 RECQL4O94761 1208 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 RETP07949 1114 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 FGFR3P22607 806 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 FCARP24071 287 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 AFMP43652 599 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 ZNF165P49910 485 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 PPP2R5DQ14738 602 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 SV2BQ7L1I2 683 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 RTL10Q7L3V2 364 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 CCDC43Q96MW1 224 aaKnown RBP22.35■■□□□ 1.17
PSEN1-225ENST00000560005 EIF2AK1Q9BQI3 630 aaKnown RBP22.35■■□□□ 1.17
PSEN1-225ENST00000560005 POLR3CQ9BUI4 534 aaPredicted RBP22.35■■□□□ 1.17
PSEN1-225ENST00000560005 BRD9Q9H8M2 597 aa22.35■■□□□ 1.17
PSEN1-225ENST00000560005 CNOT1A5YKK6 2376 aaKnown RBP22.35■■□□□ 1.17
PSEN1-225ENST00000560005 LRRIQ4A6NIV6 560 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 LRP3O75074 770 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 IGFBP6P24592 240 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-225ENST00000560005 RPA1P27694 616 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 DEKP35659 375 aaKnown RBP22.34■■□□□ 1.17
PSEN1-225ENST00000560005 DPYDQ12882 1025 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 TMEM119Q4V9L6 283 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 PPP4R3CPQ6ZMV5 832 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 MAMSTRQ6ZN01 415 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 MLKLQ8NB16 471 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 BPIFA3Q9BQP9 254 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 AVENQ9NQS1 362 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-225ENST00000560005 SEMA4GQ9NTN9 838 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 ANKEF1Q9NU02 776 aa22.34■■□□□ 1.17
PSEN1-225ENST00000560005 PRMT7Q9NVM4 692 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-225ENST00000560005 TTLL13PA6NNM8 815 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 KCNA4P22459 653 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 RARRES1P49788 294 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 CCR3P51677 355 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 PRR23CQ6ZRP0 262 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 FAM3CQ92520 227 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 LARP4BQ92615 738 aaKnown RBP22.33■■□□□ 1.17
PSEN1-225ENST00000560005 PRIMPOLQ96LW4 560 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 HSD17B14Q9BPX1 270 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 IER2Q9BTL4 223 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 PDZD7Q9H5P4 517 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 LMAN1LQ9HAT1 526 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 TUFT1Q9NNX1 390 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 GPRC5CQ9NQ84 441 aa22.33■■□□□ 1.17
PSEN1-225ENST00000560005 A0A087WWV3 80 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 SMTNL1A8MU46 457 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 B3GAT3O94766 335 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 LYPLA2O95372 231 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 PTPN2P17706 415 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 SIM2Q14190 667 aaPredicted RBP22.32■■□□□ 1.16
PSEN1-225ENST00000560005 TMEM132AQ24JP5 1023 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 FAM78AQ5JUQ0 283 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 MAEAQ7L5Y9 396 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 TCEAL4Q96EI5 215 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 PNMA5Q96PV4 448 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 C7orf25Q9BPX7 421 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 TRMT61BQ9BVS5 477 aaKnown RBP22.32■■□□□ 1.16
PSEN1-225ENST00000560005 DNAJC25Q9H1X3 360 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 ZFP14Q9HCL3 533 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 BACE2Q9Y5Z0 518 aa22.32■■□□□ 1.16
PSEN1-225ENST00000560005 NRG2O14511 850 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-225ENST00000560005 N4BP3O15049 544 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 GDF9O60383 454 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 USO1O60763 962 aaKnown RBP22.31■■□□□ 1.16
PSEN1-225ENST00000560005 LRG1P02750 347 aa22.31■■□□□ 1.16
PSEN1-225ENST00000560005 XRCC6P12956 609 aaKnown RBP eCLIP22.31■■□□□ 1.16
PSEN1-225ENST00000560005 TKTP29401 623 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms