RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 FSCN2O14926 492 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 THAP12O43422 761 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.52
SPG11-217ENST00000559511 HPDP32754 393 aaPredicted RBP11.77□□□□□ -0.52
SPG11-217ENST00000559511 ZNF132P52740 706 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 MAMLD1Q13495 774 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 MXD4Q14582 209 aaPredicted RBP11.77□□□□□ -0.52
SPG11-217ENST00000559511 TAPT1Q6NXT6 567 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 TRIM72Q6ZMU5 477 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 PHF13Q86YI8 300 aaPredicted RBP11.77□□□□□ -0.52
SPG11-217ENST00000559511 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 C1orf54Q8WWF1 131 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 TCP11Q8WWU5 503 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 FAM212AQ96EL1 285 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.52
SPG11-217ENST00000559511 LRRC19Q9H756 370 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 RRAGCQ9HB90 399 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 ADAM22Q9P0K1 906 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 PPME1Q9Y570 386 aa11.77□□□□□ -0.52
SPG11-217ENST00000559511 OGTO15294 1046 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 PROSCO94903 275 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 GJB6O95452 261 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 SHBGP04278 402 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 SLC1A1P43005 524 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.53
SPG11-217ENST00000559511 FNTAP49354 379 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 MYL6P60660 151 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 MCL1Q07820 350 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 MAPK6Q16659 721 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 SPDYCQ5MJ68 293 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 GJC2Q5T442 439 aaPredicted RBP11.77□□□□□ -0.53
SPG11-217ENST00000559511 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.53
SPG11-217ENST00000559511 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 RUFY4Q6ZNE9 571 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 ZNF606Q8WXB4 792 aa11.77□□□□□ -0.53
SPG11-217ENST00000559511 CPSF3Q9UKF6 684 aaKnown RBP11.77□□□□□ -0.53
SPG11-217ENST00000559511 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 B4GALT5O43286 388 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 GAS2O43903 313 aaKnown RBP11.76□□□□□ -0.53
SPG11-217ENST00000559511 ERLIN2O94905 339 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
SPG11-217ENST00000559511 CD58P19256 250 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PROZP22891 400 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PMS2P54278 862 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 TAS2R40P59535 323 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 ARHGAP1Q07960 439 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 GRM1Q13255 1194 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 SNX1Q13596 522 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 SGO2Q562F6 1265 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PLEKHA7Q6IQ23 1121 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 SRLQ86TD4 932 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 C2orf69Q8N8R5 385 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PTPN18Q99952 460 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PABPC3Q9H361 631 aaKnown RBP11.76□□□□□ -0.53
SPG11-217ENST00000559511 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 PTPRHQ9HD43 1115 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPG11-217ENST00000559511 PASKQ96RG2 1323 aa11.76□□□□□ -0.53
SPG11-217ENST00000559511 STRNO43815 780 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 ZEB2O60315 1214 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 ECEL1O95672 775 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 HOXC6P09630 235 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 LSP1P33241 339 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 CCT5P48643 541 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 AP3M2P53677 418 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 OSTNP61366 133 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 PPARDQ03181 441 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 KRT71Q3SY84 523 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 LIN9Q5TKA1 542 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 CDR2LQ86X02 465 aaPredicted RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 CEP120Q8N960 986 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 ART4Q93070 314 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 NLRP4Q96MN2 994 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 RUNDC3BQ96NL0 473 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 ZNF236Q9UL36 1845 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 RBM47A0AV96 593 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 A6NNZ2 444 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 TP73O15350 636 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 NUDT17P0C025 328 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 GBP1P32455 592 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 MDH1P40925 334 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 SLC26A2P50443 739 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 CLCN3P51790 818 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
SPG11-217ENST00000559511 PPP1R7Q15435 360 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 DUOXA2Q1HG44 320 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 ZNF394Q53GI3 561 aa11.75□□□□□ -0.53
SPG11-217ENST00000559511 AGBL2Q5U5Z8 902 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms