RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 FAM26FQ5R3K3 315 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 C9orf57Q5W0N0 161 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 ARMCX5Q6P1M9 558 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
LRRC28-214ENST00000559433 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 CBWD1Q9BRT8 395 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 PCIF1Q9H4Z3 704 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.64□□□□□ -0.23
LRRC28-214ENST00000559433 FBXL5Q9UKA1 691 aa13.64□□□□□ -0.23
LRRC28-214ENST00000559433 WDR27A2RRH5 827 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 GOLGA8IPA6NC78 632 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 GOLGA8JA6NMD2 632 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 PRRG1O14668 218 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
LRRC28-214ENST00000559433 TBC1D4O60343 1298 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 LDHAP00338 332 aaKnown RBP13.63□□□□□ -0.23
LRRC28-214ENST00000559433 PFKFB1P16118 471 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 LILRA4P59901 499 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
LRRC28-214ENST00000559433 CUL4BQ13620 913 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 UNC13DQ70J99 1090 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 RTL10Q7L3V2 364 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 BMP8AQ7Z5Y6 402 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 GRASPQ7Z6J2 395 aaPredicted RBP13.63□□□□□ -0.23
LRRC28-214ENST00000559433 USP37Q86T82 979 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 EFCAB13Q8IY85 973 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 GRAMD1CQ8IYS0 662 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 ZNF461Q8TAF7 563 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 MFSD1Q9H3U5 465 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 DPP3Q9NY33 737 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 RBAKQ9NYW8 714 aaPredicted RBP13.63□□□□□ -0.23
LRRC28-214ENST00000559433 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 TIMM13Q9Y5L4 95 aaPredicted RBP13.63□□□□□ -0.23
LRRC28-214ENST00000559433 UBE4BO95155 1302 aa13.63□□□□□ -0.23
LRRC28-214ENST00000559433 A0A1B0GVL5 298 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 PIRO00625 290 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
LRRC28-214ENST00000559433 EXTL3O43909 919 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 N4BP1O75113 896 aaKnown RBP13.62□□□□□ -0.23
LRRC28-214ENST00000559433 ABLIM3O94929 683 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 SLFN14P0C7P3 912 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 ODC1P11926 461 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 CPB1P15086 417 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 FSHRP23945 695 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 CMA1P23946 247 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 TDGQ13569 410 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 EPM2AIP1Q7L775 607 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-214ENST00000559433 NT5DC4Q86YG4 428 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 BRSK2Q8IWQ3 736 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 GPD1LQ8N335 351 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 MYADMQ96S97 322 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
LRRC28-214ENST00000559433 CYP4F11Q9HBI6 524 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 IGSF9Q9P2J2 1179 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 FBXL21Q9UKT6 434 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 NOTCH4Q99466 2003 aa13.62□□□□□ -0.23
LRRC28-214ENST00000559433 PVALEFA0A1B0GWK0 134 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 ANO9A1A5B4 782 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 ARHGEF37A1IGU5 675 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 STK25O00506 426 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 KIAA0391O15091 583 aaKnown RBP13.61□□□□□ -0.23
LRRC28-214ENST00000559433 SPTLC1O15269 473 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 OAZ2O95190 189 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 LRG1P02750 347 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 POU2F2P09086 479 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 ATF2P15336 505 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 TYMPP19971 482 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 PAX3P23760 479 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 HOXD13P35453 343 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 TAF6P49848 677 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 WNT7BP56706 349 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 NTHL1P78549 312 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 TFAMQ00059 246 aaKnown RBP13.61□□□□□ -0.23
LRRC28-214ENST00000559433 EHHADHQ08426 723 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 TPGS2Q68CL5 300 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 OVOS1Q6IE37 1185 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 NELFCDQ8IXH7 590 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 FBXL6Q8N531 539 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 ZNF507Q8TCN5 953 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 NXPE3Q969Y0 559 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 PAGE5Q96GU1 130 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 SENP8Q96LD8 212 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 PRRX2Q99811 253 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 OXCT2Q9BYC2 517 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-214ENST00000559433 KCNH6Q9H252 994 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 SMOC2Q9H3U7 446 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 KCNK12Q9HB15 430 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 HCFC1R1Q9NWW0 138 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 EPS15L1Q9UBC2 864 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 USP25Q9UHP3 1055 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
LRRC28-214ENST00000559433 KMT2EQ8IZD2 1858 aa13.61□□□□□ -0.23
LRRC28-214ENST00000559433 OR6C75A6NL08 312 aa13.6□□□□□ -0.23
LRRC28-214ENST00000559433 SEC24AO95486 1093 aa13.6□□□□□ -0.23
LRRC28-214ENST00000559433 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
LRRC28-214ENST00000559433 RFX1P22670 979 aa13.6□□□□□ -0.23
LRRC28-214ENST00000559433 PLA2G5P39877 138 aa13.6□□□□□ -0.23
LRRC28-214ENST00000559433 SYKP43405 635 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms