RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CTXN3Q4LDR2 81 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 C9orf57Q5W0N0 161 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 ARMCX5Q6P1M9 558 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 CEP57L1Q8IYX8 460 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 APPL2Q8NEU8 664 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 ACSF2Q96CM8 615 aaPredicted RBP11.86□□□□□ -0.51
SPG11-216ENST00000559347 PIDD1Q9HB75 910 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
SPG11-216ENST00000559347 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 SORCS3Q9UPU3 1222 aa11.86□□□□□ -0.51
SPG11-216ENST00000559347 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 GOLGA8IPA6NC78 632 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 GOLGA8JA6NMD2 632 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 KIAA0391O15091 583 aaKnown RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 SPTLC1O15269 473 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 CCL16O15467 120 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 EXTL3O43909 919 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 ASGR2P07307 311 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 SLFN14P0C7P3 912 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 ODC1P11926 461 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 ATF2P15336 505 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 TYMPP19971 482 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 LILRA4P59901 499 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 YWHAHQ04917 246 aaPredicted RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 UVSSAQ2YD98 709 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 TRIM67Q6ZTA4 783 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 RTL10Q7L3V2 364 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 GET4Q7L5D6 327 aaPredicted RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 GPD1LQ8N335 351 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 ZNF461Q8TAF7 563 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 DPP3Q9NY33 737 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 RAPGEFL1Q9UHV5 662 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 TIMM13Q9Y5L4 95 aaPredicted RBP11.85□□□□□ -0.51
SPG11-216ENST00000559347 PTPRDP23468 1912 aa11.85□□□□□ -0.51
SPG11-216ENST00000559347 DENND4CQ5VZ89 1909 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 PVALEFA0A1B0GWK0 134 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 ARHGEF37A1IGU5 675 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 TGFB1I1O43294 461 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 KLRC4O43908 158 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 XYLBO75191 536 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 OAZ2O95190 189 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 CPB1P15086 417 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 PAX3P23760 479 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
SPG11-216ENST00000559347 ARPP19P56211 112 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 NTHL1P78549 312 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 TPGS2Q68CL5 300 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 DSTYKQ6XUX3 929 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 HFE2Q6ZVN8 426 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
SPG11-216ENST00000559347 TCEAL8Q8IYN2 117 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 NOC3LQ8WTT2 800 aaKnown RBP11.84□□□□□ -0.51
SPG11-216ENST00000559347 SCFD1Q8WVM8 642 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 SENP8Q96LD8 212 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 MYADMQ96S97 322 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 SMOC2Q9H3U7 446 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 AGPAT3Q9NRZ7 376 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 HSPBP1Q9NZL4 362 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 EPS15L1Q9UBC2 864 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 INSL5Q9Y5Q6 135 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 PTPRJQ12913 1337 aa11.84□□□□□ -0.51
SPG11-216ENST00000559347 COL4A2P08572 1712 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 TMEM221A6NGB7 291 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 M0R296 226 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 SEC24AO95486 1093 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 VNN2O95498 520 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 CYP11A1P05108 521 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 OR4Q2P0C623 313 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 TAF6P49848 677 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 NDUFA8P51970 172 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 TFAMQ00059 246 aaKnown RBP11.83□□□□□ -0.52
SPG11-216ENST00000559347 OVOS1Q6IE37 1185 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 USP37Q86T82 979 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 CBWD2Q8IUF1 395 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 NELFCDQ8IXH7 590 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 UBALD2Q8IYN6 164 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 ZNF560Q96MR9 790 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
SPG11-216ENST00000559347 GOLPH3LQ9H4A5 285 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 PDE11AQ9HCR9 933 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 SLC39A2Q9NP94 309 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms